Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene204907 SustainPine v3.0 377
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 2.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene204931 SustainPine v3.0 456
AutoFact: 60S ribosomal protein L32-1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NH95_PHYIT 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene204940 SustainPine v3.0 622
AutoFact: Elongation factor 2 n=5 Tax=Caenorhabditis RepID=EF2_CAEEL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 2 6.474e-43
Putative C-terminus
sp_v3.0_unigene204948 SustainPine v3.0 413
AutoFact: 90 kDa heat shock protein n=1 Tax=Hepialus pui RepID=D2KCJ2_9NEOP 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 82 4.664e-15
C-terminus
sp_v3.0_unigene204963 SustainPine v3.0 487
AutoFact: Histone H2B.1 n=3 Tax=Tetrahymena RepID=H2B1_TETTH 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H2B 7.362e-34
Complete
sp_v3.0_unigene204967 SustainPine v3.0 436
AutoFact: PREDICTED: similar to ribosomal protein L32e [Tribolium castaneum] gb|EFA09212.1| ribosomal protein L32 [Tribolium castaneum] 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L32 2.024e-07
Complete
sp_v3.0_unigene204971 SustainPine v3.0 323
AutoFact: Ribosomal protein L19 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q70MM2_CRAGI 2.0e-14
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Sma3: Ribosomal protein L19 0.0
Complete
sp_v3.0_unigene204973 SustainPine v3.0 391
AutoFact: 60S ribosomal protein L7 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WTG6_9STRA 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7-2 1.005e-07
C-terminus
sp_v3.0_unigene204983 SustainPine v3.0 441
AutoFact: 60s ribosomal protein l9 n=1 Tax=Pfiesteria piscicida RepID=E8Z6A8_PFIPI 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 5.046e-22
C-terminus
sp_v3.0_unigene204992 SustainPine v3.0 352
AutoFact: 40S ribosomal protein S9 (Fragment) n=1 Tax=Cyanophora paradoxa RepID=Q9SCG0_CYAPA 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S9 4.2039e-45
C-terminus
sp_v3.0_unigene204999 SustainPine v3.0 439
AutoFact: Putative 60S ribosomal protein RPL32 n=1 Tax=Phoronis muelleri RepID=B2YI48_9BILA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L32 2.024e-07
Putative Complete
sp_v3.0_unigene205002 SustainPine v3.0 304
AutoFact: YALI0F11055p n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6C242_YARLI 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 3.65e-18
Putative C-terminus
sp_v3.0_unigene205004 SustainPine v3.0 545
AutoFact: ribosomal protein L21, putative [Ixodes scapularis] gb|AAY66944.1| ribosomal protein L21 [Ixodes scapularis] gb|EEC03119.1| ribosomal protein L21, putative [Ixodes scapularis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L21 3.591e-10
Complete
sp_v3.0_unigene205007 SustainPine v3.0 490
AutoFact: Histone H2B n=8 Tax=Paramecium RepID=A0BEG1_PARTE 6.0e-40
FL-Next: sp=Histone H2B; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
Sma3: Histone H2B 5.155e-34
Complete
sp_v3.0_unigene205013 SustainPine v3.0 452
AutoFact: PREDICTED: histone H4-like n=1 Tax=Pan troglodytes RepID=UPI00020E3732 9.0e-39
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Histone H4 3.748e-14
Complete
sp_v3.0_unigene205025 SustainPine v3.0 459
AutoFact: Ribosomal protein L32 [Mus musculus] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene205053 SustainPine v3.0 510
AutoFact: Similar to 60s ribosomal protein l9 n=1 Tax=Leptosphaeria maculans RepID=E4ZQI2_LEPMC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 3.488e-18
C-terminus
sp_v3.0_unigene205401 SustainPine v3.0 638
AutoFact: Ribosomal protein L5 n=1 Tax=Glossina morsitans morsitans RepID=D3TQT3_GLOMM 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L5 1.708e-14
C-terminus
sp_v3.0_unigene205413 SustainPine v3.0 480
AutoFact: PREDICTED: 60S ribosomal protein L9 [Apis mellifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L9 4.36e-18
N-terminus
sp_v3.0_unigene205429 SustainPine v3.0 478
AutoFact: Histone H2A (Fragment) n=3 Tax=Adineta vaga RepID=B5LNF8_ADIVA 0.0
FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
Sma3: Histone H2A 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain