Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18041 SustainPine v3.0 605
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.465e-36
C-terminus
sp_v3.0_unigene18042 SustainPine v3.0 906
• AutoFact: 60S ribosomal protein n=1 Tax=Ajellomyces capsulatus H88 RepID=F0USJ3_AJEC8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.452e-08
Complete
sp_v3.0_unigene18134 SustainPine v3.0 1081
• AutoFact: ATP synthase subunit gamma, mitochondrial n=5 Tax=Arabidopsis RepID=ATPG3_ARATH 0.0
• FL-Next: sp=ATP synthase gamma chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase gamma chain 6.86636e-44
N-terminus
sp_v3.0_unigene18229 SustainPine v3.0 1415
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-27
• FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene18260 SustainPine v3.0 802
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine endopeptidase degp2, putative 6.15e-13
Putative C-terminus
sp_v3.0_unigene18272 SustainPine v3.0 842
• AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 5.0e-39
• FL-Next: sp=SKP1-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Fimbriata-associated protein 1.421e-16
Complete
sp_v3.0_unigene18285 SustainPine v3.0 754
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 2.94273e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene18319 SustainPine v3.0 2836
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene18326 SustainPine v3.0 2630
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene18372 SustainPine v3.0 501
• AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.651e-07
N-terminus
sp_v3.0_unigene18398 SustainPine v3.0 663
• AutoFact: Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Bi-ubiquitin 1.777e-08
Complete
sp_v3.0_unigene18399 SustainPine v3.0 1474
• AutoFact: Voltage-dependent anion channel protein n=1 Tax=Spinacia oleracea RepID=Q41368_SPIOL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Voltage-dependent anion-selective channel protein 9.095e-32
Complete
sp_v3.0_unigene18475 SustainPine v3.0 758
• AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein phosphatase 0.0
C-terminus
sp_v3.0_unigene18628 SustainPine v3.0 642
• AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.976e-37
Complete
sp_v3.0_unigene18632 SustainPine v3.0 709
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 3.0e-37
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Ubiquitin, putative 1.219e-10
Putative Complete
sp_v3.0_unigene18638 SustainPine v3.0 866
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ATP-dependent RNA helicase 6.299e-07
C-terminus
sp_v3.0_unigene18659 SustainPine v3.0 1201
• AutoFact: Polyubiquitin-C n=586 Tax=cellular organisms RepID=UBC_HUMAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bi-ubiquitin 1.777e-08
Putative Complete
sp_v3.0_unigene18674 SustainPine v3.0 673
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.465e-36
C-terminus
sp_v3.0_unigene18677 SustainPine v3.0 790
• AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin, putative 4.863e-07
Complete
sp_v3.0_unigene18719 SustainPine v3.0 493
• AutoFact: Ethylene responsive element binding protein C1 n=1 Tax=Capsicum annuum RepID=Q32W75_CAPAN 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.846e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain