Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photoperiodism, flowering

Term: GO:0048573  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene149866 SustainPine v3.0 309
AutoFact: B3 domain-containing transcription factor NGA2 n=3 Tax=Arabidopsis RepID=NGA2_ARATH 1.0e-13
FL-Next: sp=B3 domain-containing transcription factor NGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene152707 SustainPine v3.0 458
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD40 repeat protein 9.735e-10
C-terminus
sp_v3.0_unigene153312 SustainPine v3.0 415
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD40 repeat protein 1.177e-09
C-terminus
sp_v3.0_unigene154268 SustainPine v3.0 344
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD40 repeat protein 1.054e-09
C-terminus
sp_v3.0_unigene154723 SustainPine v3.0 365
AutoFact: U2 small nuclear RNA auxiliary factor 1 (Fragment) n=1 Tax=Microcosmus squamiger RepID=E3PQY0_9ASCI 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 1.517e-11
Internal
sp_v3.0_unigene165805 SustainPine v3.0 476
AutoFact: Splicing factor U2af small subunit B [Arabidopsis thaliana] ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana] sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName: Full=U2 auxiliary factor 35 kDa s 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.746e-11
N-terminus
sp_v3.0_unigene166753 SustainPine v3.0 128
AutoFact: Splicing factor U2AF 26 kDa subunit n=2 Tax=Agaricales RepID=A8N5I3_COPC7 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.196e-11
N-terminus
sp_v3.0_unigene166924 SustainPine v3.0 255
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6T4_PHYPA 4.0e-31
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene184309 SustainPine v3.0 772
AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 3.873e-12
Internal
sp_v3.0_unigene185766 SustainPine v3.0 345
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SII5_VITVI 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene190854 SustainPine v3.0 393
AutoFact: Splicing factor U2af 38 kDa subunit n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UL33_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.461e-11
Internal
sp_v3.0_unigene190982 SustainPine v3.0 537
AutoFact: AP2/ERF and B3 domain-containing protein Os01g0693400 n=1 Tax=Oryza sativa Japonica Group RepID=Y1934_ORYSJ 8.0e-35
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: AP2 domain-containing transcription factor 4.889e-10
Internal
sp_v3.0_unigene196315 SustainPine v3.0 200
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 5.0e-24
FL-Next: sp=Phytochrome A-associated F-box protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene198610 SustainPine v3.0 372
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.422e-11
N-terminus
sp_v3.0_unigene198615 SustainPine v3.0 270
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Picea sitchensis RepID=B8LPE1_PICSI 9.00054e-42
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene204854 SustainPine v3.0 282
AutoFact: Homeobox-leucine zipper protein HOX23 n=3 Tax=Oryza sativa RepID=HOX23_ORYSJ 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Homeobox protein, putative 2.154e-18
Internal
sp_v3.0_unigene210169 SustainPine v3.0 581
AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 3.277e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain