Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photoperiodism, flowering

Term: GO:0048573  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77936 SustainPine v3.0 328
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Populus trichocarpa RepID=B9I985_POPTR 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Putative N-terminus
sp_v3.0_unigene78272 SustainPine v3.0 252
AutoFact: B3 domain-containing protein Os04g0581400 n=2 Tax=Oryza sativa Japonica Group RepID=Y4814_ORYSJ 3.0e-24
FL-Next: sp=B3 domain-containing protein Os04g0581400; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 5.902e-08
Internal
sp_v3.0_unigene78835 SustainPine v3.0 260
AutoFact: Casein kinase II beta chain, putative n=1 Tax=Ricinus communis RepID=B9SKF5_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase II beta chain, putative 3.345e-16
Internal
sp_v3.0_unigene78885 SustainPine v3.0 402
AutoFact: B3 domain-containing transcription factor NGA1 n=5 Tax=Arabidopsis RepID=NGA1_ARATH 7.0e-19
FL-Next: sp=B3 domain-containing transcription factor NGA3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 5.058e-08
Internal
sp_v3.0_unigene93773 SustainPine v3.0 1049
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.307e-11
C-terminus
sp_v3.0_unigene96856 SustainPine v3.0 708
AutoFact: RAV transcription factor n=2 Tax=Capsicum annuum RepID=Q4G3H5_CAPAN 4.0e-17
FL-Next: sp=B3 domain-containing protein Os03g0120900; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 3.493e-08
C-terminus
sp_v3.0_unigene100438 SustainPine v3.0 590
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene105142 SustainPine v3.0 510
AutoFact: DNA binding protein Rav [Capsicum annuum] 2.0e-39
FL-Next: tr=APETALA2 L1; Larix x marschlinsii. 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 2.116e-08
Internal
sp_v3.0_unigene106227 SustainPine v3.0 409
AutoFact: putative COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP1 regulatory protein 1.256e-11
Putative N-terminus
sp_v3.0_unigene106556 SustainPine v3.0 427
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 7.641e-14
Putative N-terminus
sp_v3.0_unigene110161 SustainPine v3.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene112435 SustainPine v3.0 525
AutoFact: B3 domain-containing transcription factor NGA3 [Arabidopsis thaliana] sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3; AltName: Full=Protein NGATHA3 gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana] gb|ACP18973. 1.0e-34
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: B3 DNA binding domain containing protein 3.687e-06
Internal
sp_v3.0_unigene128026 SustainPine v3.0 604
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Ricinus communis RepID=B9RN02_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
C-terminus
sp_v3.0_unigene128186 SustainPine v3.0 406
AutoFact: Epstein-Barr nuclear antigen, putative n=1 Tax=Ricinus communis RepID=B9R923_RICCO 3.0e-30
FL-Next: tr=Epstein-Barr nuclear antigen, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene130999 SustainPine v3.0 246
AutoFact: putative casein kinase II beta subunit [Oryza sativa Japonica Group] gb|ABB47995.2| Casein kinase II beta-4 subunit, putative, expressed [Oryza sativa Japonica Group] gb|EEC67455.1| hypothetical protein OsI_34680 [Oryza sativa Indica Group] 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Casein kinase II subunit beta-4 1.681e-11
C-terminus
sp_v3.0_unigene131612 SustainPine v3.0 530
AutoFact: U2 auxiliary factor small subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: U2 snrnp auxiliary factor, small subunit, putative 2.089e-11
Putative N-terminus
sp_v3.0_unigene133882 SustainPine v3.0 403
AutoFact: terminal flower-like protein [Picea abies] gb|ADE77648.1| unknown [Picea sitchensis] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flowering locus T 3.179e-26
N-terminus
sp_v3.0_unigene137120 SustainPine v3.0 629
AutoFact: RAV transcription factor n=2 Tax=Capsicum annuum RepID=Q4G3H5_CAPAN 3.0e-23
FL-Next: sp=B3 domain-containing transcription factor NGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 4.381e-08
Internal
sp_v3.0_unigene142105 SustainPine v3.0 355
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SII5_VITVI 1.0e-25
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene149693 SustainPine v3.0 462
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK07_9ASPA 1.0e-21
FL-Next: sp=AP2/ERF and B3 domain-containing transcription factor RAV1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 2.102e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain