Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: HhH-GPD domain

Term: IPR003265  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene152077 SustainPine v3.0 457
AutoFact: Ubiquitin carrier protein n=2 Tax=Dictyosteliida RepID=D3BQS8_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 4.316e-43
C-terminus
sp_v3.0_unigene152783 SustainPine v3.0 570
AutoFact: ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] gb|EAL42926.1| ubiquitin-conjugating enzyme family protein [Entamoeba histolytica HM-1:IMSS] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carrier protein 6.73e-36
Complete
sp_v3.0_unigene155532 SustainPine v3.0 335
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 5.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.652e-17
Internal
sp_v3.0_unigene155701 SustainPine v3.0 390
AutoFact: Endonuclease III homolog n=1 Tax=Schizosaccharomyces pombe 972h- RepID=NTH1_SCHPO 1.0e-36
FL-Next: tr=Predicted protein; Ostreococcus lucimarinus (strain CCE9901). 0.0
Internal
sp_v3.0_unigene159449 SustainPine v3.0 379
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.574e-15
Putative C-terminus
sp_v3.0_unigene159494 SustainPine v3.0 480
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.72e-14
C-terminus
sp_v3.0_unigene159581 SustainPine v3.0 412
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene159602 SustainPine v3.0 301
AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.755e-10
Internal
sp_v3.0_unigene159740 SustainPine v3.0 433
AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 4.0e-13
FL-Next: sp=DEMETER-like protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160076 SustainPine v3.0 493
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUP9_ORYSJ 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.11e-09
Internal
sp_v3.0_unigene160354 SustainPine v3.0 417
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyprotein 2.801e-16
Internal
sp_v3.0_unigene160483 SustainPine v3.0 408
AutoFact: NV19190; similar to pol polyprotein 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.213e-07
N-terminus
sp_v3.0_unigene161261 SustainPine v3.0 437
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.327e-36
Internal
sp_v3.0_unigene161429 SustainPine v3.0 249
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.068e-18
Internal
sp_v3.0_unigene161710 SustainPine v3.0 416
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.806e-27
Internal
sp_v3.0_unigene161763 SustainPine v3.0 439
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 5.0e-37
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.627e-16
Putative C-terminus
sp_v3.0_unigene162258 SustainPine v3.0 454
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene162885 SustainPine v3.0 486
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 5.305e-11
Internal
sp_v3.0_unigene162923 SustainPine v3.0 471
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 2.608e-10
Internal
sp_v3.0_unigene163094 SustainPine v3.0 414
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.145e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain