Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Domain of unknown function DUF834

Term: IPR008552  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64082 SustainPine v3.0 264
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.0e-38
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene65153 SustainPine v3.0 144
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 2.0e-10
• FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene65281 SustainPine v3.0 218
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-15
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative C-terminus
sp_v3.0_unigene65282 SustainPine v3.0 301
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 2.0e-22
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.859e-26
Internal
sp_v3.0_unigene66214 SustainPine v3.0 372
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.091e-32
Putative C-terminus
sp_v3.0_unigene66274 SustainPine v3.0 217
• AutoFact: H0515C11.9 protein n=1 Tax=Oryza sativa RepID=Q01MI2_ORYSA 3.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene66409 SustainPine v3.0 316
• AutoFact: OSJNBa0074B10.6 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XS94_ORYSJ 5.0e-19
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy sub-class; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.51e-18
Internal
sp_v3.0_unigene66575 SustainPine v3.0 365
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.181e-23
Putative Complete
sp_v3.0_unigene66611 SustainPine v3.0 402
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 9.0e-39
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.134e-21
Putative C-terminus
sp_v3.0_unigene66855 SustainPine v3.0 387
• AutoFact: Putative polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6F2D6_SOLDE 7.0e-31
• FL-Next: tr=Putative polyprotein, identical; Solanum demissum (Wild potato). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.80909e-45
Internal
sp_v3.0_unigene67079 SustainPine v3.0 273
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 7.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene67142 SustainPine v3.0 381
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene67165 SustainPine v3.0 345
• AutoFact: Polyprotein n=1 Tax=Sorghum bicolor RepID=Q9XE68_SORBI 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.713e-38
Putative Complete
sp_v3.0_unigene67296 SustainPine v3.0 291
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Putative N-terminus
sp_v3.0_unigene67587 SustainPine v3.0 335
• AutoFact: ORF333 n=1 Tax=Vitis vinifera RepID=B6VJW0_VITVI 4.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.39114e-43
N-terminus
sp_v3.0_unigene67736 SustainPine v3.0 249
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q10G32_ORYSJ 2.0e-16
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative N-terminus
sp_v3.0_unigene67911 SustainPine v3.0 372
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUH7_ORYSJ 3.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.13e-34
N-terminus
sp_v3.0_unigene68016 SustainPine v3.0 375
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R0G6_ORYSJ 5.0e-30
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.14094e-41
Internal
sp_v3.0_unigene68081 SustainPine v3.0 352
• AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR 1.0e-22
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.724e-30
Internal
sp_v3.0_unigene68585 SustainPine v3.0 267
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.744e-15
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain