|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene59359
|
SustainPine v3.0
|
224
|
|
• AutoFact: Polyprotein, putative (Fragment) n=1 Tax=Solanum tuberosum RepID=Q0KIJ4_SOLTU
|
2.0e-18
|
|
• FL-Next: tr=OSJNBa0014F04.5 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene59603
|
SustainPine v3.0
|
316
|
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
4.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.142e-25
|
|
Putative Complete
|
|
sp_v3.0_unigene59627
|
SustainPine v3.0
|
225
|
|
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI
|
3.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Pol protein integrase region
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene60076
|
SustainPine v3.0
|
274
|
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
8.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
3.733e-30
|
|
Internal
|
|
sp_v3.0_unigene60372
|
SustainPine v3.0
|
363
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ
|
2.0e-28
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene60492
|
SustainPine v3.0
|
320
|
|
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Putative polyprotein
|
4.435e-11
|
|
Internal
|
|
sp_v3.0_unigene60623
|
SustainPine v3.0
|
365
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE
|
6.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene60642
|
SustainPine v3.0
|
454
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QPZ1_ORYSJ
|
6.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
5.005e-37
|
|
Putative Complete
|
|
sp_v3.0_unigene61320
|
SustainPine v3.0
|
295
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA
|
6.0e-30
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene61813
|
SustainPine v3.0
|
304
|
|
• AutoFact: Polyprotein n=1 Tax=Sorghum bicolor RepID=Q9XE68_SORBI
|
1.0e-28
|
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene62187
|
SustainPine v3.0
|
289
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Sma3: Putative polyprotein
|
9.72e-09
|
|
Internal
|
|
sp_v3.0_unigene62243
|
SustainPine v3.0
|
379
|
|
• AutoFact: RVT_1 domain containing protein
|
2.0e-08
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.094e-39
|
|
Putative Complete
|
|
sp_v3.0_unigene62330
|
SustainPine v3.0
|
286
|
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
4.0e-19
|
|
• FL-Next: tr=Polyprotein; Primula vulgaris.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.572e-09
|
|
Internal
|
|
sp_v3.0_unigene62427
|
SustainPine v3.0
|
358
|
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR
|
7.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.559e-16
|
|
Putative C-terminus
|
|
sp_v3.0_unigene62561
|
SustainPine v3.0
|
237
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ
|
1.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
3.636e-10
|
|
Internal
|
|
sp_v3.0_unigene62867
|
SustainPine v3.0
|
311
|
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ
|
1.0e-13
|
|
• FL-Next: tr=Gag-pol polyprotein; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene63343
|
SustainPine v3.0
|
318
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE
|
7.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene63470
|
SustainPine v3.0
|
357
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA
|
9.0e-39
|
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.379e-36
|
|
Putative C-terminus
|
|
sp_v3.0_unigene63611
|
SustainPine v3.0
|
208
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.961e-19
|
|
Internal
|
|
sp_v3.0_unigene64021
|
SustainPine v3.0
|
341
|
|
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH
|
2.0e-31
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.812e-17
|
|
Putative C-terminus
|
