Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene55592
|
SustainPine v3.0
|
326
|
• AutoFact: Putative reverse transcriptase (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q6UU14_ORYSJ
|
4.0e-27
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.273e-40
|
|
Putative N-terminus
|
sp_v3.0_unigene55598
|
SustainPine v3.0
|
308
|
• AutoFact: gag-pol [Zea mays]
|
1.0e-22
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.396e-31
|
|
Putative Complete
|
sp_v3.0_unigene55684
|
SustainPine v3.0
|
209
|
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ
|
6.0e-14
|
• FL-Next: tr=OSJNBa0070D17.9 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Sma3: Putative polyprotein
|
4.751e-13
|
|
Internal
|
sp_v3.0_unigene55957
|
SustainPine v3.0
|
342
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ
|
3.0e-33
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative C-terminus
|
sp_v3.0_unigene55977
|
SustainPine v3.0
|
388
|
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
• Sma3: Pol protein integrase region
|
0.0
|
|
Internal
|
sp_v3.0_unigene56001
|
SustainPine v3.0
|
307
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ
|
1.0e-14
|
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
• Sma3: Pol protein integrase region
|
2.051e-40
|
|
Internal
|
sp_v3.0_unigene56014
|
SustainPine v3.0
|
460
|
• AutoFact: reverse transcriptase [Taxus baccata]
|
1.99993e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
0.0
|
|
Putative Complete
|
sp_v3.0_unigene56571
|
SustainPine v3.0
|
397
|
• AutoFact: Putative retroelement integrase n=1 Tax=Arabidopsis thaliana RepID=Q8S8M1_ARATH
|
5.0e-35
|
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.436e-26
|
|
C-terminus
|
sp_v3.0_unigene56993
|
SustainPine v3.0
|
475
|
• AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ
|
3.0e-27
|
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
4.153e-11
|
|
Putative C-terminus
|
sp_v3.0_unigene57010
|
SustainPine v3.0
|
294
|
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE
|
1.0e-21
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.902e-10
|
|
N-terminus
|
sp_v3.0_unigene57083
|
SustainPine v3.0
|
281
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3G0_ORYSJ
|
5.0e-14
|
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
1.252e-12
|
|
Internal
|
sp_v3.0_unigene57500
|
SustainPine v3.0
|
438
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
2.0e-30
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.752e-17
|
|
Putative C-terminus
|
sp_v3.0_unigene57679
|
SustainPine v3.0
|
232
|
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI
|
2.0e-25
|
• FL-Next: tr=Putative retroelement pol polyprotein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: Pol protein integrase region
|
0.0
|
|
Internal
|
sp_v3.0_unigene57763
|
SustainPine v3.0
|
201
|
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q10HE7_ORYSJ
|
2.0e-16
|
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
4.69e-38
|
|
Internal
|
sp_v3.0_unigene57982
|
SustainPine v3.0
|
338
|
• AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ
|
2.0e-22
|
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
1.209e-11
|
|
Internal
|
sp_v3.0_unigene58022
|
SustainPine v3.0
|
402
|
• AutoFact: Integrase (Fragment) n=1 Tax=Gossypium herbaceum RepID=Q7XYU4_GOSHE
|
1.0e-21
|
• FL-Next: tr=Putative uncharacterized protein orf215; Nicotiana tabacum (Common tobacco). Mitochondrion.
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
9.156e-30
|
|
C-terminus
|
sp_v3.0_unigene58036
|
SustainPine v3.0
|
372
|
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC
|
7.0e-36
|
• FL-Next: tr=Polyprotein; Primula vulgaris.
|
0.0
|
• Sma3: Pol protein integrase region
|
1.636e-18
|
|
Internal
|
sp_v3.0_unigene58834
|
SustainPine v3.0
|
324
|
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ
|
1.0e-18
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass
|
2.105e-23
|
|
Putative Complete
|
sp_v3.0_unigene59205
|
SustainPine v3.0
|
378
|
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI
|
2.99878e-43
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
• Sma3: Pol protein integrase region
|
0.0
|
|
Internal
|
sp_v3.0_unigene59213
|
SustainPine v3.0
|
301
|
• AutoFact: gag/pol polyprotein [Arabidopsis thaliana]
|
3.0e-21
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.228e-14
|
|
Internal
|