Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transposon, En/Spm-like

Term: IPR004242  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161037 SustainPine v3.0 403
AutoFact: Regulator of nonsense transcripts 1-like n=7 Tax=Oryza sativa RepID=Q5Z4Y8_ORYSJ 3.0e-26
FL-Next: sp=Probable helicase MAGATAMA 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161240 SustainPine v3.0 316
AutoFact: Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic n=1 Tax=Medicago truncatula RepID=Q2HU05_MEDTR 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.71222e-43
Internal
sp_v3.0_unigene161426 SustainPine v3.0 473
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R1D8_ORYSJ 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.4055e-42
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal
sp_v3.0_unigene161747 SustainPine v3.0 387
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 1.0e-29
FL-Next: tr=Probable integrase-common tobacco-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Integrase 1.697e-06
Putative N-terminus
sp_v3.0_unigene164328 SustainPine v3.0 405
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.13e-16
N-terminus
sp_v3.0_unigene164692 SustainPine v3.0 133
AutoFact: transcription factor MYB4 [Brassica rapa var. purpuraria] 7.0e-16
FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: R2r3-myb transcription factor, putative 1.395e-15
N-terminus
sp_v3.0_unigene164829 SustainPine v3.0 125
AutoFact: R2R3-MYB transcription factor MYB20 (Fragment) n=1 Tax=Picea glauca RepID=C0JTD4_PICGL 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: R2r3-myb transcription factor, putative 4.008e-14
Internal
sp_v3.0_unigene164876 SustainPine v3.0 287
AutoFact: transcription factor MYBJ6 [Glycine max] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 3.022e-20
Internal
sp_v3.0_unigene165729 SustainPine v3.0 420
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.107e-36
Internal
sp_v3.0_unigene165765 SustainPine v3.0 368
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-38
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.311e-32
Putative C-terminus
sp_v3.0_unigene166051 SustainPine v3.0 449
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SYX7_RICCO 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 4.881e-21
N-terminus
sp_v3.0_unigene166744 SustainPine v3.0 225
AutoFact: Transcription factor MYB32 n=2 Tax=Arabidopsis RepID=MYB32_ARATH 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 2.695e-30
N-terminus
sp_v3.0_unigene167403 SustainPine v3.0 81
AutoFact: R2R3-MYB transcription factor MYB13 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTD9_PINTA 1.0e-07
FL-Next: tr=R2R3-MYB transcription factor MYB13; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB-like DNA-binding domain protein 3.274e-09
Internal
sp_v3.0_unigene167929 SustainPine v3.0 188
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR 4.0e-14
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.763e-13
Internal
sp_v3.0_unigene184262 SustainPine v3.0 626
AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.667e-27
Putative C-terminus
sp_v3.0_unigene185907 SustainPine v3.0 478
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 2.061e-29
Internal
sp_v3.0_unigene187210 SustainPine v3.0 445
AutoFact: MYB transcription factor MYB92 [Glycine max] 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 3.356e-13
N-terminus
sp_v3.0_unigene187669 SustainPine v3.0 214
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.124e-16
Internal
sp_v3.0_unigene189093 SustainPine v3.0 951
AutoFact: rve domain containing protein 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain