Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Transposon, En/Spm-like

Term: IPR004242  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53696 SustainPine v3.0 189
AutoFact: R2R3-MYB transcription factor MYB13 n=2 Tax=Picea RepID=A5JYF7_PICGL 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Typical P-type R2R3 Myb protein 7.208e-10
N-terminus
sp_v3.0_unigene54543 SustainPine v3.0 447
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 8.0e-32
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.076e-32
Putative C-terminus
sp_v3.0_unigene55300 SustainPine v3.0 407
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.459e-33
C-terminus
sp_v3.0_unigene55848 SustainPine v3.0 507
AutoFact: rve domain containing protein 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene57500 SustainPine v3.0 438
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.752e-17
Putative C-terminus
sp_v3.0_unigene58015 SustainPine v3.0 470
AutoFact: RVT_1 domain containing protein 2.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.108e-07
Putative Complete
sp_v3.0_unigene58101 SustainPine v3.0 342
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.912e-35
Internal
sp_v3.0_unigene58445 SustainPine v3.0 208
AutoFact: Myb-like protein P n=2 Tax=Fagopyrum RepID=A5A367_9CARY 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.449e-24
Putative N-terminus
sp_v3.0_unigene58681 SustainPine v3.0 400
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene59213 SustainPine v3.0 301
AutoFact: gag/pol polyprotein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.228e-14
Internal
sp_v3.0_unigene59932 SustainPine v3.0 391
AutoFact: pfam00665, rve, Integrase core domain 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene60444 SustainPine v3.0 353
AutoFact: RVT_1 domain containing protein 2.0e-12
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.6e-08
Putative Complete
sp_v3.0_unigene60492 SustainPine v3.0 320
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 1.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Putative polyprotein 4.435e-11
Internal
sp_v3.0_unigene61530 SustainPine v3.0 92
AutoFact: Myb-like protein P [Fagopyrum cymosum] gb|ABP57070.1| Myb-like protein P [Fagopyrum cymosum] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB1 8.654e-11
Internal
sp_v3.0_unigene62187 SustainPine v3.0 289
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative polyprotein 9.72e-09
Internal
sp_v3.0_unigene62427 SustainPine v3.0 358
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Medicago truncatula RepID=A2Q5V4_MEDTR 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.559e-16
Putative C-terminus
sp_v3.0_unigene63611 SustainPine v3.0 208
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.961e-19
Internal
sp_v3.0_unigene64021 SustainPine v3.0 341
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 2.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.812e-17
Putative C-terminus
sp_v3.0_unigene64506 SustainPine v3.0 216
AutoFact: OSJNBa0061A09.4 protein n=3 Tax=Oryza sativa RepID=Q7FA20_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.453e-30
Internal
sp_v3.0_unigene65229 SustainPine v3.0 243
AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-21
FL-Next: tr=F7F22.17, putative; Asparagus officinalis (Garden asparagus). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain