Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: embryo development ending in seed dormancy

Term: GO:0009793  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10130 SustainPine v3.0 416
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 5.99994e-41
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene10133 SustainPine v3.0 1998
AutoFact: COP9 signalosome complex subunit 1 [Arabidopsis thaliana] sp|P45432.2|CSN1_ARATH RecName: Full=COP9 signalosome complex subunit 1; Short=CSN complex subunit 1; AltName: Full=Constitutive photomorphogenesis protein 11; AltName: Full=Protein FUSCA 6 gb|AAK2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 1 4.617e-09
Complete
sp_v3.0_unigene10157 SustainPine v3.0 459
AutoFact: Putative RNA processing factor 1-like n=1 Tax=Solanum tuberosum RepID=Q2V9A2_SOLTU 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10238 SustainPine v3.0 481
AutoFact: C2H2 type zinc finger transcription factor-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9FH19_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10317 SustainPine v3.0 1538
AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Somatic embryogenesis receptor kinase, putative 1.303e-09
Putative N-terminus
sp_v3.0_unigene10543 SustainPine v3.0 2336
AutoFact: tubulin folding cofactor E [Arabidopsis thaliana] gb|AAM63142.1| unknown [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10735 SustainPine v3.0 1213
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.026e-35
C-terminus
sp_v3.0_unigene10787 SustainPine v3.0 641
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 8.306e-12
Putative C-terminus
sp_v3.0_unigene10938 SustainPine v3.0 607
AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative RING finger 1 1.29e-10
Internal
sp_v3.0_unigene10969 SustainPine v3.0 1431
AutoFact: Cyclin-dependent kinase n=1 Tax=Helianthus tuberosus RepID=Q8GVD7_HELTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin dependent kinase 2.423e-16
Complete
sp_v3.0_unigene11420 SustainPine v3.0 797
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Argonaute protein group 1.317e-33
C-terminus
sp_v3.0_unigene11498 SustainPine v3.0 1313
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Argonaute protein group 4.545e-30
Internal
sp_v3.0_unigene11532 SustainPine v3.0 1306
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.574e-37
Complete
sp_v3.0_unigene11597 SustainPine v3.0 1888
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 9.139e-23
Putative C-terminus
sp_v3.0_unigene11667 SustainPine v3.0 1228
AutoFact: Phospholipase D (Fragment) n=2 Tax=Vitis vinifera RepID=D7TW92_VITVI 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D 3.365e-33
C-terminus
sp_v3.0_unigene11790 SustainPine v3.0 1264
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene12100 SustainPine v3.0 636
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene12104 SustainPine v3.0 470
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene12165 SustainPine v3.0 1918
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb|AAF02143.1|AC009853_3 putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] dbj|BAC42699.1| putative beta-1,3-glucanase precursor [Arabidopsis thaliana] gb|AAO64098.1| putative g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucan endo-1,3-beta-glucosidase, putative 4.633e-24
Complete
sp_v3.0_unigene12301 SustainPine v3.0 866
AutoFact: transcription factor TCP24 [Arabidopsis thaliana] ref|NP_849730.1| transcription factor TCP24 [Arabidopsis thaliana] sp|Q9C758.1|TCP24_ARATH RecName: Full=Transcription factor TCP24 gb|AAG50562.1|AC073506_4 hypothetical protein [Arabidopsis thaliana] gb|A 4.0e-25
FL-Next: sp=Transcription factor TCP24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DICHOTOMA-like protein 3.888e-23
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain