Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: seed germination

Term: GO:0009845  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene80950 SustainPine v3.0 239
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 4.358e-27
Internal
sp_v3.0_unigene82534 SustainPine v3.0 406
AutoFact: Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S7R9_NEMVE 4.0e-05
Sma3: Repetitive proline-rich cell wall protein 1 1.248e-09
coding
sp_v3.0_unigene82975 SustainPine v3.0 268
AutoFact: Extensin_2 multi-domain protein 9.0e-11
Sma3: Proline-rich protein 3.494e-13
coding
sp_v3.0_unigene83367 SustainPine v3.0 294
AutoFact: Drf_FH1 multi-domain protein 2.0e-14
Sma3: Extensin 1.357e-22
coding
sp_v3.0_unigene83369 SustainPine v3.0 302
AutoFact: Drf_FH1 multi-domain protein 3.0e-13
Sma3: Proline-rich protein 3.074e-17
coding
sp_v3.0_unigene85465 SustainPine v3.0 319
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Proline-rich protein 1.528e-10
coding
sp_v3.0_unigene86147 SustainPine v3.0 265
AutoFact: Extensin_2 multi-domain protein 6.0e-13
Sma3: Extensin 1.555e-24
coding
sp_v3.0_unigene86832 SustainPine v3.0 410
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U598_VITVI 6.0e-07
Sma3: Extensin 3.391e-22
coding
sp_v3.0_unigene86928 SustainPine v3.0 340
AutoFact: Extensin_2 multi-domain protein 4.0e-12
Sma3: Extensin 1.85e-18
coding
sp_v3.0_unigene94204 SustainPine v3.0 487
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene94516 SustainPine v3.0 849
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 3.078e-26
Internal
sp_v3.0_unigene94575 SustainPine v3.0 1024
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.836e-26
Internal
sp_v3.0_unigene94791 SustainPine v3.0 655
AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|O81291.1|LRK44_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.4; Short=LecRK-IV.4; Flags: Precursor gb|AAC19274.1| T14P8.4 [Arabidopsis thaliana] emb|CAB80735 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lectin-like receptor kinase 7 1.997e-15
Internal
sp_v3.0_unigene95853 SustainPine v3.0 636
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 2.289e-26
Internal
sp_v3.0_unigene97194 SustainPine v3.0 484
AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.705e-24
Putative C-terminus
sp_v3.0_unigene97625 SustainPine v3.0 452
AutoFact: Phospholipase D n=1 Tax=Picea sitchensis RepID=B8LQ49_PICSI 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D 2.747e-27
Internal
sp_v3.0_unigene97850 SustainPine v3.0 325
AutoFact: Phospholipase d beta, putative n=1 Tax=Ricinus communis RepID=B9RDI4_RICCO 6.0e-36
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D alpha 1 9.833e-25
Internal
sp_v3.0_unigene98351 SustainPine v3.0 445
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 4.089e-11
N-terminus
sp_v3.0_unigene100793 SustainPine v3.0 299
AutoFact: Os07g0175900 protein n=2 Tax=Oryza sativa RepID=Q6ZF04_ORYSJ 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 7.141e-33
Internal
sp_v3.0_unigene100880 SustainPine v3.0 392
AutoFact: Phospholipase D n=1 Tax=Populus trichocarpa RepID=B9GKQ7_POPTR 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D 6.205e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain