Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: seed germination

Term: GO:0009845  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene69016 SustainPine v3.0 243
AutoFact: AP2-like ethylene-responsive transcription factor PLT2 n=2 Tax=Arabidopsis RepID=PLET2_ARATH 6.0e-21
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene69031 SustainPine v3.0 161
AutoFact: D-xylose-proton symporter-like 1 n=2 Tax=Arabidopsis RepID=XYLL1_ARATH 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sugar transporter, putative 5.728e-06
Internal
sp_v3.0_unigene69282 SustainPine v3.0 235
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 2.0e-32
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene69688 SustainPine v3.0 215
AutoFact: Phospholipase D n=2 Tax=Populus trichocarpa RepID=B9GH43_POPTR 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D alpha 1 4.073e-30
Internal
sp_v3.0_unigene69919 SustainPine v3.0 352
AutoFact: putative inositol polyphosphate 5'-phosphatase [Arabidopsis thaliana] 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 8.132e-33
Internal
sp_v3.0_unigene72066 SustainPine v3.0 205
AutoFact: Unassigned protein
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 5.35997e-41
Internal
sp_v3.0_unigene72405 SustainPine v3.0 152
AutoFact: Os04g0653600 protein n=5 Tax=Oryza sativa RepID=Q0J9G5_ORYSJ 3.0e-20
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene72811 SustainPine v3.0 204
AutoFact: putative phosphatase (with alternative splicing) [Oryza sativa Japonica Group] 2.0e-20
FL-Next: Isoform 2 of Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 2.957e-21
Internal
sp_v3.0_unigene73898 SustainPine v3.0 348
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 2.38e-26
Internal
sp_v3.0_unigene74190 SustainPine v3.0 292
AutoFact: endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] gb|AAN46835.1| At1g71710/F14O23_9 [Arabidopsis thaliana] gb|AEE35221.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inositol-1,4,5-triphosphate-5-phosphatase 2.28e-08
C-terminus
sp_v3.0_unigene75017 SustainPine v3.0 191
AutoFact: Protein AINTEGUMENTA, putative n=1 Tax=Ricinus communis RepID=B9RM33_RICCO 2.0e-14
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 7.00649e-45
Internal
sp_v3.0_unigene75514 SustainPine v3.0 320
AutoFact: GTP-binding protein G alpha subunit n=1 Tax=Daucus carota RepID=A1E287_DAUCA 4.0e-23
FL-Next: sp=Guanine nucleotide-binding protein alpha-1 subunit; Solanum tuberosum (Potato). 0.0
Sma3: Guanine nucleotide-binding protein alpha-1 subunit 7.668e-30
N-terminus
sp_v3.0_unigene75871 SustainPine v3.0 504
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 2.0e-16
FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative C-terminus
sp_v3.0_unigene76562 SustainPine v3.0 315
AutoFact: [K] COG5641 GATA Zn-finger-containing transcription factor 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor, putative 1.072e-17
N-terminus
sp_v3.0_unigene77357 SustainPine v3.0 398
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 0.0
N-terminus
sp_v3.0_unigene78043 SustainPine v3.0 353
AutoFact: Phospholipase D n=3 Tax=Oryza sativa RepID=Q69P64_ORYSJ 2.0e-35
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D alpha 1 7.475e-31
Internal
sp_v3.0_unigene78345 SustainPine v3.0 128
AutoFact: Phospholipase D n=2 Tax=Selaginella moellendorffii RepID=D8QXW1_SELML 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D alpha 1 2.057e-30
Internal
sp_v3.0_unigene78550 SustainPine v3.0 240
AutoFact: Guanine nucleotide binding protein alpha subunit n=1 Tax=Lentinula edodes RepID=Q870G7_LENED 6.0e-35
FL-Next: sp=Guanine nucleotide-binding protein alpha-1 subunit; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Guanine nucleotide-binding protein alpha-1 subunit 1.351e-25
Internal
sp_v3.0_unigene79107 SustainPine v3.0 424
AutoFact: Phospholipase D n=5 Tax=Rosaceae RepID=B5TGQ1_PRUPE 3.0e-39
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D alpha 1 5.359e-35
Internal
sp_v3.0_unigene79511 SustainPine v3.0 187
AutoFact: AP2/EREBP transcription factor [Brassica napus] gb|ABD72476.1| AP2/EREBP transcriptional factor WRI1 [Brassica napus] 2.0e-26
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain