Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: seed germination

Term: GO:0009845  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene26913 SustainPine v3.0 559
AutoFact: glycine-rich RNA-binding protein 4 [Arabidopsis thaliana] ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana] dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana] gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsi 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein, putative 7.666e-07
Complete
sp_v3.0_unigene27508 SustainPine v3.0 1270
AutoFact: receptor lectin kinase [Arabidopsis thaliana] sp|O80939.1|LRK41_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.1; Short=Arabidopsis thaliana lectin-receptor kinase e; Short=AthlecRK-e; Short=LecRK-IV.1; AltName: Full=Lectin Recepto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 3.066e-26
Putative C-terminus
sp_v3.0_unigene28719 SustainPine v3.0 453
AutoFact: putative inositol polyphosphate 5-phosphatase [Oryza sativa Japonica Group] 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Type I inositol polyphosphate 5-phosphatase, putative 1.483e-24
Putative Complete
sp_v3.0_unigene28840 SustainPine v3.0 2898
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-09
FL-Next: sp=Protein LHY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: MYB transcription factor 1.275e-11
Complete
sp_v3.0_unigene29273 SustainPine v3.0 1185
AutoFact: APETALA2-related transcription factor 2 n=1 Tax=Picea abies RepID=Q9FV33_PICAB 0.0
FL-Next: tr=APETALA2-related transcription factor 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
Putative N-terminus
sp_v3.0_unigene30191 SustainPine v3.0 849
AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MU01_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene32943 SustainPine v3.0 839
AutoFact: Glycine-rich RNA-binding protein n=1 Tax=Sequoia sempervirens RepID=E5FXB3_SEQSE 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene33203 SustainPine v3.0 968
AutoFact: DUF1421 multi-domain protein 1.0e-14
Sma3: Extensin 1.028e-08
coding
sp_v3.0_unigene33724 SustainPine v3.0 900
AutoFact: DUF1421 multi-domain protein 2.0e-14
Sma3: Extensin 1.157e-21
coding
sp_v3.0_unigene34499 SustainPine v3.0 749
AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene34589 SustainPine v3.0 783
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 1.87354e-42
N-terminus
sp_v3.0_unigene34724 SustainPine v3.0 809
AutoFact: AG-motif binding protein-2 n=1 Tax=Nicotiana tabacum RepID=Q76DY2_TOBAC 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA zinc finger family protein 5.167e-16
Putative Complete
sp_v3.0_unigene34874 SustainPine v3.0 1054
AutoFact: Drf_FH1 multi-domain protein 3.0e-17
Sma3: Extensin 3.495e-22
coding
sp_v3.0_unigene34919 SustainPine v3.0 814
AutoFact: Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S7R9_NEMVE 2.0e-07
Sma3: Extensin 2.202e-30
coding
sp_v3.0_unigene35733 SustainPine v3.0 767
AutoFact: DUF1421 multi-domain protein 5.0e-19
Sma3: Extensin 2.05907e-41
coding
sp_v3.0_unigene35947 SustainPine v3.0 287
AutoFact: Extensin_2 multi-domain protein 9.0e-10
coding
sp_v3.0_unigene36148 SustainPine v3.0 857
AutoFact: Drf_FH1 multi-domain protein 9.0e-19
Sma3: Extensin 2.733e-39
coding
sp_v3.0_unigene37523 SustainPine v3.0 1719
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: AP2 domain-containing transcription factor 0.0
C-terminus
sp_v3.0_unigene37584 SustainPine v3.0 3858
AutoFact: Phospholipase D n=1 Tax=Picea sitchensis RepID=B8LQ49_PICSI 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospholipase D 6.055e-33
Complete
sp_v3.0_unigene37893 SustainPine v3.0 2680
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain