Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17301 SustainPine v3.0 1416
AutoFact: DUF1421 multi-domain protein 2.0e-15
Sma3: Repetitive proline-rich cell wall protein 1 8.439e-09
putative_coding
sp_v3.0_unigene17400 SustainPine v3.0 1219
AutoFact: Atrophin-1 multi-domain protein 1.0e-18
Sma3: Extensin 1.784e-30
coding
sp_v3.0_unigene17445 SustainPine v3.0 1448
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 7.0e-15
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 1.447e-36
Putative C-terminus
sp_v3.0_unigene17470 SustainPine v3.0 1169
AutoFact: DUF1421 multi-domain protein 3.0e-14
unknown
sp_v3.0_unigene17666 SustainPine v3.0 880
AutoFact: Drf_FH1 multi-domain protein 9.0e-21
Sma3: Extensin 2.055e-36
coding
sp_v3.0_unigene19567 SustainPine v3.0 620
AutoFact: Tryp_alpha_amyl domain containing protein 4.0e-08
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 1.45e-13
Complete
sp_v3.0_unigene20968 SustainPine v3.0 596
AutoFact: Extensin_2 multi-domain protein 1.0e-12
Sma3: Extensin 1.997e-13
coding
sp_v3.0_unigene21288 SustainPine v3.0 822
AutoFact: DUF1421 multi-domain protein 2.0e-20
Sma3: Extensin 3.273e-30
coding
sp_v3.0_unigene21326 SustainPine v3.0 771
AutoFact: Drf_FH1 multi-domain protein 9.0e-19
Sma3: Extensin 2.667e-34
coding
sp_v3.0_unigene21347 SustainPine v3.0 1465
AutoFact: DUF1421 multi-domain protein 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Extensin 3.432e-30
Complete
sp_v3.0_unigene21502 SustainPine v3.0 792
AutoFact: proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] emb|CAM43270.1| proteophosphoglycan ppg4 [Leishmania braziliensis MHOM/BR/75/M2904] 2.0e-09
FL-Next: sp=Putative membrane protein ycf1; Cucumis sativus (Cucumber). Plastid; Chloroplast. 0.0
Sma3: Extensin 2.226e-24
Internal
sp_v3.0_unigene21513 SustainPine v3.0 603
AutoFact: Extensin_2 multi-domain protein 4.0e-23
Sma3: Extensin 0.0
coding
sp_v3.0_unigene25489 SustainPine v3.0 763
AutoFact: Tryp_alpha_amyl domain containing protein 8.0e-13
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 1.752e-13
Complete
sp_v3.0_unigene27257 SustainPine v3.0 1253
AutoFact: PREDICTED: similar to Scale keratin (S-ker) (sKer) [Gallus gallus] 1.0e-05
FL-Next: tr=Os06g0316300 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Extensin 0.0
Complete
sp_v3.0_unigene27364 SustainPine v3.0 424
AutoFact: Drf_FH1 multi-domain protein 7.0e-36
Sma3: Extensin-like protein 1.735e-19
coding
sp_v3.0_unigene29598 SustainPine v3.0 1120
AutoFact: Tryp_alpha_amyl multi-domain protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cortical cell-delineating protein 1.512e-23
Putative Complete
sp_v3.0_unigene29668 SustainPine v3.0 961
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Sma3: Extensin 3.312e-31
coding
sp_v3.0_unigene29848 SustainPine v3.0 920
AutoFact: Tryp_alpha_amyl domain containing protein 8.0e-12
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 3.474e-10
Complete
sp_v3.0_unigene30315 SustainPine v3.0 891
AutoFact: Drf_FH1 multi-domain protein 4.0e-21
Sma3: Extensin 0.0
coding
sp_v3.0_unigene30359 SustainPine v3.0 583
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 7.0e-26
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Sma3: 36.4 kDa proline-rich protein 3.136e-10
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain