Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
sp_v3.0_unigene95100
|
SustainPine v3.0
|
378
|
• AutoFact: replication factor C1 [Arabidopsis thaliana] emb|CAC34494.1| replication factor C large subunit-like protein [Arabidopsis thaliana] gb|AAT47816.1| At5g22010 [Arabidopsis thaliana] gb|AED92968.1| replication factor C1 [Arabidopsis thaliana]
|
5.0e-27
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Internal
|
sp_v3.0_unigene95908
|
SustainPine v3.0
|
926
|
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pentatricopeptide repeat protein
|
7.015e-22
|
|
C-terminus
|
sp_v3.0_unigene96237
|
SustainPine v3.0
|
654
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.953e-18
|
|
Internal
|
sp_v3.0_unigene96478
|
SustainPine v3.0
|
853
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
2.288e-09
|
|
Internal
|
sp_v3.0_unigene96967
|
SustainPine v3.0
|
457
|
• AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Poly[ADP-ribose] synthetase 1
|
5.889e-13
|
|
N-terminus
|
sp_v3.0_unigene97136
|
SustainPine v3.0
|
216
|
• AutoFact: PHD domain containing protein
|
2.0e-05
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
sp_v3.0_unigene97395
|
SustainPine v3.0
|
731
|
• AutoFact: LIM domain protein WLIM-1 [Helianthus annuus]
|
5.99994e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Pollen-specific protein SF3, putative
|
2.757e-22
|
|
Complete
|
sp_v3.0_unigene97743
|
SustainPine v3.0
|
362
|
• AutoFact: CTR1-like protein kinase [Rosa hybrid cultivar]
|
4.0e-10
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Map3k delta-1 protein kinase, putative
|
1.49e-23
|
|
Internal
|
sp_v3.0_unigene98685
|
SustainPine v3.0
|
454
|
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS
|
8.0e-32
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.741e-24
|
|
Internal
|
sp_v3.0_unigene99172
|
SustainPine v3.0
|
395
|
• AutoFact: N-acetyltransferase n=2 Tax=Arabidopsis thaliana RepID=B3H6L5_ARATH
|
7.0e-19
|
• FL-Next: tr=N-acetyltransferase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Sma3: Putative uncharacterized protein At2g41450.2
|
9.26e-06
|
|
Internal
|
sp_v3.0_unigene99345
|
SustainPine v3.0
|
492
|
• AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
N-terminus
|
sp_v3.0_unigene100927
|
SustainPine v3.0
|
938
|
• AutoFact: putative DNA repair protein XRCC1 [Arabidopsis thaliana] emb|CAC16136.1| putative DNA repair protein XRCC1 [Arabidopsis thaliana]
|
0.0
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
• Sma3: Putative DNA repair protein
|
5.848e-06
|
|
Putative C-terminus
|
sp_v3.0_unigene101075
|
SustainPine v3.0
|
521
|
• AutoFact: rve domain containing protein
|
8.0e-09
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.65e-23
|
|
Internal
|
sp_v3.0_unigene101565
|
SustainPine v3.0
|
771
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Copia-type polyprotein
|
2.978e-11
|
|
Putative C-terminus
|
sp_v3.0_unigene101848
|
SustainPine v3.0
|
552
|
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME
|
4.99997e-41
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.622e-17
|
|
Internal
|
sp_v3.0_unigene103065
|
SustainPine v3.0
|
495
|
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ
|
1.0e-38
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.363e-35
|
|
Internal
|
sp_v3.0_unigene103270
|
SustainPine v3.0
|
430
|
• AutoFact: pfam12738, PTCB-BRCT, twin BRCT domain
|
2.0e-17
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Putative N-terminus
|
sp_v3.0_unigene103358
|
SustainPine v3.0
|
667
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.419e-26
|
|
Putative C-terminus
|
sp_v3.0_unigene103557
|
SustainPine v3.0
|
484
|
• AutoFact: topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana] gb|AEE35963.1| topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana]
|
9.0e-21
|
• FL-Next: tr=Topbp1, putative; Ricinus communis (Castor bean).
|
0.0
|
• Sma3: Topbp1, putative
|
6.823e-06
|
|
Internal
|
sp_v3.0_unigene104264
|
SustainPine v3.0
|
560
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
1.0e-35
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
6.614e-19
|
|
Internal
|