Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: BRCT domain

Term: IPR001357  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene71823 SustainPine v3.0 267
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 4.415e-19
Internal
sp_v3.0_unigene71848 SustainPine v3.0 328
• AutoFact: H0112G12.6 protein n=2 Tax=Oryza sativa RepID=Q01JL4_ORYSA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 1.566e-06
Internal
sp_v3.0_unigene72114 SustainPine v3.0 229
• AutoFact: RVT_2 domain containing protein 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.176e-27
Putative N-terminus
sp_v3.0_unigene72940 SustainPine v3.0 208
• AutoFact: RVT_2 domain containing protein 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73756 SustainPine v3.0 181
• AutoFact: Unassigned protein 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene74347 SustainPine v3.0 388
• AutoFact: topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana] gb|AEE35963.1| topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana] 1.0e-38
• FL-Next: sp=BRCT domain-containing protein At4g02110; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75692 SustainPine v3.0 356
• AutoFact: PREDICTED: PHD and RING finger domain-containing protein 1 [Equus caballus] 8.0e-09
• FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75883 SustainPine v3.0 469
• AutoFact: Poly-(ADP-ribose) polymerase I n=1 Tax=Aplysia californica RepID=C8CCN1_APLCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Poly[ADP-ribose] synthetase 1 3.448e-12
Putative C-terminus
sp_v3.0_unigene76074 SustainPine v3.0 376
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.069e-13
Putative C-terminus
sp_v3.0_unigene76201 SustainPine v3.0 439
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 1.855e-07
Internal
sp_v3.0_unigene77840 SustainPine v3.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Transposon protein, putative, unclassified 2.994e-09
Putative C-terminus
sp_v3.0_unigene79482 SustainPine v3.0 368
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.26e-07
Internal
sp_v3.0_unigene80234 SustainPine v3.0 141
• AutoFact: DNA replication regulator dpb11, putative n=1 Tax=Ricinus communis RepID=B9RNG3_RICCO 1.0e-13
• FL-Next: sp=BRCT domain-containing protein At4g02110; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene80276 SustainPine v3.0 153
• AutoFact: DNA polymerase lambda [Oryza sativa Japonica Group] 1.0e-06
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene80484 SustainPine v3.0 139
• AutoFact: DNA polymerase lambda subunit [Arabidopsis thaliana] emb|CAC21394.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ABE65612.1| DNA polymerase lambda [Arabidopsis thaliana] gb|ADM33939.1| DNA pol lambda [Arabidopsis thaliana] gb|AEE28588.1| DNA polymeras 3.0e-12
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Sma3: DNA polymerase lambda 2.116e-09
Internal
sp_v3.0_unigene80496 SustainPine v3.0 263
• AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
• FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA ligase 2.851e-07
Internal
sp_v3.0_unigene81638 SustainPine v3.0 142
• AutoFact: DNA ligase n=1 Tax=Oryza sativa RepID=Q01KE4_ORYSA 3.0e-15
• FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DNA ligase 7.815e-10
Internal
sp_v3.0_unigene94449 SustainPine v3.0 1471
• AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene94945 SustainPine v3.0 492
• AutoFact: RecName: Full=Putative poly [ADP-ribose] polymerase 3; Short=PARP-3; AltName: Full=NAD(+) ADP-ribosyltransferase 3; Short=ADPRT-3; AltName: Full=Poly[ADP-ribose] synthase 3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Poly[ADP-ribose] synthetase 3 3.214e-17
Internal
sp_v3.0_unigene94986 SustainPine v3.0 597
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.99967e-42
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.1e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain