Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Domain of unknown function DUF659

Term: IPR007021  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57649 SustainPine v3.0 370
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 6.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative N-terminus
sp_v3.0_unigene57696 SustainPine v3.0 303
• AutoFact: DUF659 domain containing protein 9.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 7.355e-06
Internal
sp_v3.0_unigene57736 SustainPine v3.0 358
• AutoFact: DUF659 domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene57763 SustainPine v3.0 201
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q10HE7_ORYSJ 2.0e-16
• FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.69e-38
Internal
sp_v3.0_unigene57770 SustainPine v3.0 462
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 9.146e-06
Internal
sp_v3.0_unigene57899 SustainPine v3.0 351
• AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58004 SustainPine v3.0 293
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.681e-09
C-terminus
sp_v3.0_unigene58021 SustainPine v3.0 461
• AutoFact: DUF659 domain containing protein 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene58177 SustainPine v3.0 310
• AutoFact: OSJNBa0006B20.5 protein n=2 Tax=Oryza sativa RepID=Q7XV62_ORYSJ 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 1.265e-09
Internal
sp_v3.0_unigene58191 SustainPine v3.0 311
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Triticum monococcum subsp. aegilopoides RepID=B5G4Y0_TRIMO 2.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 7.399e-27
C-terminus
sp_v3.0_unigene58263 SustainPine v3.0 473
• AutoFact: Pentatricopeptide repeat protein 77 n=1 Tax=Funaria hygrometrica RepID=F5CAE2_FUNHY 9.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58346 SustainPine v3.0 310
• AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 8.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.75e-25
C-terminus
sp_v3.0_unigene58605 SustainPine v3.0 386
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580 gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana] gb|AAO42278.1| unknown pro 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.941e-15
C-terminus
sp_v3.0_unigene58796 SustainPine v3.0 384
• AutoFact: DUF659 domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene58804 SustainPine v3.0 388
• AutoFact: Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] dbj|BAD42412.1| plant-specific family protein RPD1 [Arabidopsis thaliana] gb|AEE86235.1| Ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene58854 SustainPine v3.0 191
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Internal
sp_v3.0_unigene58907 SustainPine v3.0 410
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.962e-11
Internal
sp_v3.0_unigene58950 SustainPine v3.0 296
• AutoFact: Selenium-binding protein-like n=1 Tax=Oryza sativa Japonica Group RepID=Q8LI18_ORYSJ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 4.586e-10
C-terminus
sp_v3.0_unigene59064 SustainPine v3.0 436
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 4.99983e-42
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene59099 SustainPine v3.0 165
• AutoFact: DUF659 domain containing protein 9.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain