Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, BED-type predicted

Term: IPR003656  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene60793 SustainPine v3.0 249
AutoFact: ATP/DNA binding protein [Arabidopsis thaliana] emb|CAB87905.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78454.1| ATP/DNA binding protein [Arabidopsis thaliana] 5.0e-17
FL-Next: tr=Putative uncharacterized protein Sb05g018376; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 2.617e-07
Internal
sp_v3.0_unigene61189 SustainPine v3.0 210
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 6.36e-06
Internal
sp_v3.0_unigene61240 SustainPine v3.0 317
AutoFact: DUF659 domain containing protein 3.0e-32
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61612 SustainPine v3.0 263
AutoFact: DUF659 domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61909 SustainPine v3.0 310
AutoFact: DUF659 domain containing protein 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 3.703e-06
C-terminus
sp_v3.0_unigene61940 SustainPine v3.0 272
AutoFact: DUF659 domain containing protein 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61965 SustainPine v3.0 339
AutoFact: DUF659 domain containing protein 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene62232 SustainPine v3.0 264
AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NpPDR1 emb|CAC40990.1| ABC1 protein [Nicotiana plumbaginifolia] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene62276 SustainPine v3.0 270
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAF24818.1|AC007592_11 F12K11.21 [Arabidopsis thaliana] gb|AAU84676.1| At1g06440 [Arabidopsis thaliana] gb|AAX22272.1| At1g06440 [Arabidopsis thaliana] dbj|BAF00518.1| hypothetic 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene62455 SustainPine v3.0 226
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene62783 SustainPine v3.0 209
AutoFact: DUF659 domain containing protein 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene62832 SustainPine v3.0 183
AutoFact: DUF659 domain containing protein 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63077 SustainPine v3.0 237
AutoFact: DUF659 domain containing protein 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63137 SustainPine v3.0 310
AutoFact: DUF659 domain containing protein 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 3.007e-06
Internal
sp_v3.0_unigene63390 SustainPine v3.0 277
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CDKC 2.165e-16
Internal
sp_v3.0_unigene63692 SustainPine v3.0 220
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene64242 SustainPine v3.0 207
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene64551 SustainPine v3.0 291
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64630 SustainPine v3.0 237
AutoFact: DUF659 domain containing protein 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene64787 SustainPine v3.0 219
AutoFact: putative cyclin-dependent protein kinase [Arabidopsis thaliana] gb|AAO64868.1| At5g50860 [Arabidopsis thaliana] 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-protein kinase cdk9, putative 3.963e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain