Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cellular cell wall organization

Term: GO:0007047  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene183901 SustainPine v3.0 423
AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 2.00386e-43
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 3.825e-37
Internal
sp_v3.0_unigene184971 SustainPine v3.0 327
AutoFact: polygalacturonase 1 [Arabidopsis thaliana] sp|O80760.1|Y639_ARATH RecName: Full=Probable polygalacturonase non-catalytic subunit At1g60390; AltName: Full=Aromatic-rich glycoprotein At1g60390; Flags: Precursor gb|AAC24065.1| Strong similarity to AR0GP2 gen 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polygalacturonase-1 non-catalytic subunit beta, putative 5.379e-09
C-terminus
sp_v3.0_unigene185122 SustainPine v3.0 481
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene185136 SustainPine v3.0 360
AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative guanine nucleotide-exchange protein GEP2 1.119e-11
Internal
sp_v3.0_unigene187027 SustainPine v3.0 307
AutoFact: xyloglucan endotransglycosylase 2 [Litchi chinensis] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.3407e-42
Internal
sp_v3.0_unigene188147 SustainPine v3.0 297
AutoFact: Callose synthase 12 n=6 Tax=Camelineae RepID=CALSC_ARATH 7.0e-26
FL-Next: sp=Callose synthase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 1,3-beta-glucan synthase 1.879e-07
Internal
sp_v3.0_unigene188602 SustainPine v3.0 553
AutoFact: putative xyloglucan endotransglucosylase/hydrolase [Selaginella kraussiana] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 8.158e-40
C-terminus
sp_v3.0_unigene188609 SustainPine v3.0 306
AutoFact: xyloglucan endotransglycosylase [Musa acuminata] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.84e-21
Internal
sp_v3.0_unigene188781 SustainPine v3.0 904
AutoFact: Trypan_PARP multi-domain protein 5.0e-17
Sma3: Glycine-rich protein 4.645e-14
coding
sp_v3.0_unigene189068 SustainPine v3.0 172
AutoFact: FAP multi-domain protein 4.0e-10
Sma3: Glycine-rich protein 2.35e-12
unknown
sp_v3.0_unigene189422 SustainPine v3.0 316
AutoFact: FAP multi-domain protein 4.0e-10
Sma3: Glycine-rich protein 3.419e-12
coding
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene192884 SustainPine v3.0 276
Sma3: Beta-expansin 3 2.316e-08
coding
sp_v3.0_unigene194350 SustainPine v3.0 332
AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 4.0e-28
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-beta-1,4-glucanase 1.996e-25
C-terminus
sp_v3.0_unigene194393 SustainPine v3.0 316
AutoFact: Putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase n=3 Tax=Arabidopsis RepID=F4IFC5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194907 SustainPine v3.0 298
AutoFact: callose synthase catalytic subunit-like protein [Arabidopsis thaliana] 5.0e-36
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 1,3-beta-glucan synthase 7.363e-28
Internal
sp_v3.0_unigene196537 SustainPine v3.0 304
AutoFact: Xyloglucan endotransglycosylase 1 (Fragment) n=1 Tax=Pinus radiata RepID=B1NA42_PINRA 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_56, whole genome shotgun sequence 2.395e-11
N-terminus
sp_v3.0_unigene196928 SustainPine v3.0 762
AutoFact: Pollen major allergen No.121 isoform 1 n=1 Tax=Cryptomeria japonica RepID=Q588C0_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 5.595e-39
C-terminus
sp_v3.0_unigene198333 SustainPine v3.0 599
AutoFact: Endo-1,4-beta-glucanase, putative n=1 Tax=Ricinus communis RepID=B9RQY0_RICCO 1.0e-08
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene202573 SustainPine v3.0 330
AutoFact: RecName: Full=Expansin-B16; AltName: Full=Beta-expansin-16; AltName: Full=OsEXPB16; AltName: Full=OsaEXPb1.14; Flags: Precursor 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain