Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cellular cell wall organization

Term: GO:0007047  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165729 SustainPine v3.0 420
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.107e-36
Internal
sp_v3.0_unigene167066 SustainPine v3.0 402
AutoFact: Endo-1,4-beta-glucanase n=1 Tax=Dimocarpus longan RepID=C7EC60_9ROSI 5.0e-40
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 5.723e-40
Internal
sp_v3.0_unigene167529 SustainPine v3.0 248
AutoFact: Endo-beta-1,4-glucanase n=1 Tax=Pinus radiata RepID=O64401_PINRA 2.0e-29
FL-Next: tr=Endo-beta-1,4-glucanase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Endo-1,4-beta-glucanase 9.106e-20
Internal
sp_v3.0_unigene167568 SustainPine v3.0 304
AutoFact: Xyloglucan endotraglucosylase/hydrolase n=1 Tax=Vigna angularis RepID=C5G5Y5_PHAAN 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglucosylase/hydrolase protein 2, putative 2.186e-16
Internal
sp_v3.0_unigene167656 SustainPine v3.0 248
AutoFact: Putative reversibly glycosylated polypeptide , 3'-partial (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q84MY1_ORYSJ 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reversibly glycosylated polypeptide 2.383e-14
N-terminus
sp_v3.0_unigene168171 SustainPine v3.0 279
AutoFact: Contains similarity to a polygalacturonase-like protein gi|7529266 from Arabidopsis thaliana BAC F18P9 gb|AL138654 and contains multiple polygalacturonase (pectinase) PF|00295 domains 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polygalacturonase 2.66e-19
Internal
sp_v3.0_unigene168693 SustainPine v3.0 335
AutoFact: FAP multi-domain protein 2.0e-16
Sma3: Glycine-rich protein 2.012e-11
coding
sp_v3.0_unigene169019 SustainPine v3.0 271
AutoFact: Gly_rich multi-domain protein 7.0e-17
Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene169684 SustainPine v3.0 327
AutoFact: GRP multi-domain protein 3.0e-16
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene170457 SustainPine v3.0 330
AutoFact: FAP multi-domain protein 2.0e-15
coding
sp_v3.0_unigene171386 SustainPine v3.0 283
AutoFact: Herpes_gp2 multi-domain protein 2.0e-14
Sma3: Glycine-rich protein 9.342e-12
coding
sp_v3.0_unigene172836 SustainPine v3.0 507
AutoFact: Gly_rich multi-domain protein 5.0e-20
Sma3: Glycine-rich protein 1.685e-10
coding
sp_v3.0_unigene173381 SustainPine v3.0 520
AutoFact: Gly_rich multi-domain protein 6.0e-19
Sma3: Putative glycine rich protein 3.78e-18
coding
sp_v3.0_unigene174775 SustainPine v3.0 352
AutoFact: Drf_FH1 multi-domain protein 5.0e-16
Sma3: Plus agglutinin 8.085e-09
coding
sp_v3.0_unigene176031 SustainPine v3.0 361
AutoFact: Extensin_2 multi-domain protein 3.0e-20
Sma3: Extensin 4.527e-38
coding
sp_v3.0_unigene176476 SustainPine v3.0 406
AutoFact: Trypan_PARP multi-domain protein 1.0e-13
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 1.736e-11
coding
sp_v3.0_unigene176970 SustainPine v3.0 384
AutoFact: Gly_rich multi-domain protein 7.0e-13
Sma3: Transposon protein, putative, CACTA, En/Spm sub-class, expressed 5.387e-17
coding
sp_v3.0_unigene182868 SustainPine v3.0 1091
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 1,3-beta-glucan synthase 2.694e-38
Complete
sp_v3.0_unigene183344 SustainPine v3.0 481
AutoFact: CMCase; cellulase; endo-1,4-beta-D-glucanase (Fragment) n=2 Tax=Glycine max RepID=Q39848_SOYBN 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Endo-1,4-beta-glucanase, putative 6.783e-15
C-terminus
sp_v3.0_unigene183349 SustainPine v3.0 334
AutoFact: Callose synthase 5 n=5 Tax=Arabidopsis RepID=CALS5_ARATH 1.0e-39
FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 1,3-beta-glucan synthase 5.96e-28
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain