Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7694 SustainPine v3.0 3192
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative Complete
sp_v3.0_unigene7714 SustainPine v3.0 1025
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4B8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.701e-35
Complete
sp_v3.0_unigene7772 SustainPine v3.0 1453
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.53e-17
C-terminus
sp_v3.0_unigene7800 SustainPine v3.0 1175
AutoFact: rhamnosyl transferase [Nierembergia sp. NB17] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr15 scaffold_40, whole genome shotgun sequence 2.939e-07
C-terminus
sp_v3.0_unigene7828 SustainPine v3.0 1299
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipid binding protein, putative 2.801e-11
C-terminus
sp_v3.0_unigene7849 SustainPine v3.0 2132
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene7962 SustainPine v3.0 2221
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Argonaute family member 1.706e-18
C-terminus
sp_v3.0_unigene8239 SustainPine v3.0 2143
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcium ion binding protein, putative 3.952e-09
Complete
sp_v3.0_unigene8323 SustainPine v3.0 1710
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gb|AAB72163.1 5.097e-09
Complete
sp_v3.0_unigene8364 SustainPine v3.0 1488
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Argonaute protein group 4.374e-14
N-terminus
sp_v3.0_unigene8448 SustainPine v3.0 960
AutoFact: Probable serine/threonine-protein kinase WNK2 n=3 Tax=Oryza sativa RepID=WNK2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 6.44597e-44
Internal
sp_v3.0_unigene8537 SustainPine v3.0 2314
AutoFact: rve multi-domain protein 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8545 SustainPine v3.0 1818
AutoFact: DUF659 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8592 SustainPine v3.0 911
AutoFact: cyclin-dependent kinases regulatory subunit [Glycine max] gb|ACU14766.1| unknown [Glycine max] 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cyclin-dependent kinases regulatory subunit 9.182e-16
Complete
sp_v3.0_unigene8832 SustainPine v3.0 1930
AutoFact: PREDICTED: similar to nucleic acid binding , related n=1 Tax=Vitis vinifera RepID=UPI00019860F7 0.0
FL-Next: sp=Uncharacterized protein At4g26485; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_142, whole genome shotgun sequence 1.415e-11
Complete
sp_v3.0_unigene8836 SustainPine v3.0 3936
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.6e-31
Complete
sp_v3.0_unigene8898 SustainPine v3.0 1674
AutoFact: acyltransferase-like protein [Arabidopsis thaliana] sp|Q9ZVN2.1|Y1457_ARATH RecName: Full=Acyltransferase-like protein At1g54570, chloroplastic; Flags: Precursor gb|AAC64874.1| Contains similarity to gi|2924495 hypothetical protein Rv1920 from Mycobacteri 0.0
FL-Next: sp=Acyltransferase-like protein At1g54570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Gb|AAC64874.1 7.21e-13
C-terminus
sp_v3.0_unigene9139 SustainPine v3.0 1171
AutoFact: Cytochrome P450 n=1 Tax=Petunia x hybrida RepID=Q9MBF5_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 0.0
C-terminus
sp_v3.0_unigene9152 SustainPine v3.0 486
AutoFact: putative glutamate receptor ion channel [Arabidopsis thaliana] 0.0
FL-Next: sp=Glutamate receptor 3.5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate-gated kainate-type ion channel receptor subunit GluR5 0.0
Internal
sp_v3.0_unigene9213 SustainPine v3.0 1173
AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
FL-Next: sp=Probable xyloglucan endotransglucosylase/hydrolase protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Xyloglucan endotransglycosylase 1.08699e-41
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain