Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5839 SustainPine v3.0 1938
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipid binding protein, putative 1.301e-11
Complete
sp_v3.0_unigene5961 SustainPine v3.0 1384
AutoFact: Putative ammonium transporter AMT2 n=3 Tax=Cupressaceae RepID=Q0EEW6_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ammonium transporter 3.08286e-44
C-terminus
sp_v3.0_unigene5970 SustainPine v3.0 2774
AutoFact: DUF3506 domain containing protein 1.4013e-45
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: EXECUTER1 protein, chloroplast, putative 6.546e-10
Complete
sp_v3.0_unigene6167 SustainPine v3.0 1637
AutoFact: Xyloglucan endotransglucosylase/hydrolase 2 n=1 Tax=Rosa x borboniana RepID=Q2MK81_9ROSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.19797e-41
Complete
sp_v3.0_unigene6193 SustainPine v3.0 2999
AutoFact: dynamin like protein 2a [Arabidopsis thaliana] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dynamin, putative 2.572e-10
Complete
sp_v3.0_unigene6204 SustainPine v3.0 4065
AutoFact: DNA replication licensing factor MCM3 homolog 2 [Zea mays] sp|Q9SX04.1|MCM32_MAIZE RecName: Full=DNA replication licensing factor MCM3 homolog 2; AltName: Full=Replication origin activator 2; Short=ROA-2 gb|AAD48086.1|AF073330_1 replication origin activat 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Sma3: Minichromosome maintenance protein 3 2.202e-08
Misassembled
sp_v3.0_unigene6266 SustainPine v3.0 2033
AutoFact: putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] dbj|BAD54694.1| putative inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6367 SustainPine v3.0 2712
AutoFact: ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis thaliana] sp|Q38953.2|DHX8_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase dbj|BAB01838.1| pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis th 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.56e-40
N-terminus
sp_v3.0_unigene6380 SustainPine v3.0 2808
AutoFact: DUF3506 domain containing protein 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EXECUTER1 protein, chloroplast, putative 2.993e-10
Putative Complete
sp_v3.0_unigene6487 SustainPine v3.0 4884
AutoFact: trafficking protein particle complex subunit 10 [Dictyostelium discoideum AX4] ref|XP_644774.1| trafficking protein particle complex subunit 10 [Dictyostelium discoideum AX4] sp|Q556Z3.1|TPC10_DICDI RecName: Full=Trafficking protein particle complex subun 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene6513 SustainPine v3.0 1271
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene6670 SustainPine v3.0 1570
AutoFact: amino acid kinase-like protein [Arabidopsis thaliana] gb|AAN12957.1| unknown protein [Arabidopsis thaliana] gb|AEE30713.1| amino acid kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6676 SustainPine v3.0 898
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 5.88545e-43
N-terminus
sp_v3.0_unigene6915 SustainPine v3.0 1527
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7002 SustainPine v3.0 2055
AutoFact: Cyclin-L1, putative n=1 Tax=Ricinus communis RepID=B9RTZ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CycT1 2.18e-18
Putative Complete
sp_v3.0_unigene7121 SustainPine v3.0 1395
AutoFact: Tonoplast intrinsic protein, putative n=1 Tax=Ricinus communis RepID=B9RS20_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aquaporin, MIP family, TIP subfamily 3.44579e-42
Complete
sp_v3.0_unigene7153 SustainPine v3.0 1754
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dynamin, putative 1.536e-07
Putative C-terminus
sp_v3.0_unigene7547 SustainPine v3.0 1381
AutoFact: C2 domain-containing protein [Arabidopsis thaliana] gb|AAL10490.1| AT3g18370/MYF24_8 [Arabidopsis thaliana] gb|AAM91357.1| At3g18370/MYF24_8 [Arabidopsis thaliana] gb|AEE76087.1| C2 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plant synaptotagmin 1.975e-08
C-terminus
sp_v3.0_unigene7607 SustainPine v3.0 2523
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SF18_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Subtilisin-like protease 0.0
Complete
sp_v3.0_unigene7667 SustainPine v3.0 1147
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] ref|NP_851037.2| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Lysosomal alpha-mannosidase, putative 8.24e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain