Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase, RNA-dependent DNA polymerase

Term: IPR013103  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2990 SustainPine v3.0 2315
AutoFact: rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] gb|AEE28513.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lyase, putative 3.464e-27
Complete
sp_v3.0_unigene3007 SustainPine v3.0 5125
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Gag-Pol polyprotein 6.984e-08
Complete
sp_v3.0_unigene3153 SustainPine v3.0 4207
AutoFact: DENN (AEX-3) domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=F4IUH2_ARATH 0.0
FL-Next: tr=DENN (AEX-3) domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Suppression of tumorigenicity, putative 1.656e-09
Putative Complete
sp_v3.0_unigene3200 SustainPine v3.0 2228
AutoFact: pfam01699, Na_Ca_ex, Sodium/calcium exchanger protein 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calcium ion binding protein, putative 4.329e-09
Complete
sp_v3.0_unigene3240 SustainPine v3.0 1993
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Prolyl 4-hydroxylase alpha subunit, putative 1.979e-17
Complete
sp_v3.0_unigene3357 SustainPine v3.0 780
AutoFact: Receptor-like protein kinase 4 n=2 Tax=Arabidopsis RepID=F4JH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-receptor kinase, putative 4.235e-16
Internal
sp_v3.0_unigene3365 SustainPine v3.0 843
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene3383 SustainPine v3.0 2624
AutoFact: signal recognition particle subunit SRP72 [Arabidopsis thaliana] gb|AAG28892.1|AC008113_8 F12A21.17 [Arabidopsis thaliana] gb|AAO41909.1| unknown protein [Arabidopsis thaliana] gb|AAO50689.1| unknown protein [Arabidopsis thaliana] gb|AEE34681.1| signal re 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3464 SustainPine v3.0 2020
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Complete
sp_v3.0_unigene3524 SustainPine v3.0 1927
AutoFact: uroporphiryn-III C-methyltransferase [Medicago truncatula] 0.0
FL-Next: sp=Uroporphyrinogen-III C-methyltransferase; Cyanidium caldarium. Plastid; Chloroplast. 0.0
Sma3: Uroporphyrin III methylase 7.91e-09
Complete
sp_v3.0_unigene3549 SustainPine v3.0 1840
AutoFact: CemA-like proton extrusion protein-like protein [Arabidopsis thaliana] gb|AAL85996.1| unknown protein [Arabidopsis thaliana] gb|AAP04130.1| unknown protein [Arabidopsis thaliana] dbj|BAD43184.1| unknown protein [Arabidopsis thaliana] dbj|BAD43308.1| unkno 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene3622 SustainPine v3.0 984
AutoFact: Putative prolyl 4-hydroxylase, alpha subunit n=1 Tax=Cryptomeria japonica RepID=Q1XG55_CRYJA 0.0
FL-Next: tr=Putative prolyl 4-hydroxylase, alpha subunit; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Prolyl 4-hydroxylase alpha subunit, putative 2.546e-23
C-terminus
sp_v3.0_unigene3668 SustainPine v3.0 860
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HAT family dimerisation domain containing protein 1.788e-13
Putative C-terminus
sp_v3.0_unigene3679 SustainPine v3.0 4014
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 5'->3' exoribonuclease, putative 8.416e-16
Complete
sp_v3.0_unigene3748 SustainPine v3.0 1141
AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|P0CW97.1|PCR3_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 3; Short=AtPCR3 gb|AED93976.1| PLAC8 family protein [Arabidopsis thaliana] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGPS/D12 6.352e-20
Complete
sp_v3.0_unigene3806 SustainPine v3.0 1378
AutoFact: putative tyrosine decarboxylase [Arabidopsis thaliana] 0.0
FL-Next: sp=Tyrosine decarboxylase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Tryptophan decarboxylase 3.131e-29
C-terminus
sp_v3.0_unigene3920 SustainPine v3.0 1282
AutoFact: Glutathione-s-transferase theta, gst, putative n=1 Tax=Ricinus communis RepID=B9RCA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione-s-transferase theta, gst, putative 2.54e-10
Complete
sp_v3.0_unigene4039 SustainPine v3.0 3267
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 1.669e-06
Complete
sp_v3.0_unigene4205 SustainPine v3.0 1367
AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 3.387e-39
Complete
sp_v3.0_unigene4218 SustainPine v3.0 1782
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 3.815e-33
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain