Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retroviral aspartyl protease

Term: IPR013242  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55506 SustainPine v3.0 437
• AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.475e-09
Internal
sp_v3.0_unigene55536 SustainPine v3.0 411
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 8.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.164e-31
N-terminus
sp_v3.0_unigene55571 SustainPine v3.0 321
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 3.442e-33
Internal
sp_v3.0_unigene55592 SustainPine v3.0 326
• AutoFact: Putative reverse transcriptase (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q6UU14_ORYSJ 4.0e-27
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.273e-40
Putative N-terminus
sp_v3.0_unigene55598 SustainPine v3.0 308
• AutoFact: gag-pol [Zea mays] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.396e-31
Putative Complete
sp_v3.0_unigene55603 SustainPine v3.0 87
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q7Y1L5_ORYSJ 9.0e-07
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene55633 SustainPine v3.0 268
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUM9_ORYSJ 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene55653 SustainPine v3.0 382
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 2.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene55684 SustainPine v3.0 209
• AutoFact: OSJNBa0070D17.9 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLT9_ORYSJ 6.0e-14
• FL-Next: tr=OSJNBa0070D17.9 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Putative polyprotein 4.751e-13
Internal
sp_v3.0_unigene55837 SustainPine v3.0 214
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 1.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene55878 SustainPine v3.0 287
• AutoFact: Os08g0164800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7S9_ORYSJ 3.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 8.213e-10
Putative C-terminus
sp_v3.0_unigene55895 SustainPine v3.0 348
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q94LP8_ORYSJ 3.0e-21
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.228e-11
Internal
sp_v3.0_unigene55929 SustainPine v3.0 102
• AutoFact: Retrotransposon protein n=1 Tax=Beta vulgaris RepID=A2I5E5_BETVU 4.0e-09
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene55957 SustainPine v3.0 342
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 3.0e-33
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative C-terminus
sp_v3.0_unigene55977 SustainPine v3.0 388
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene56001 SustainPine v3.0 307
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 1.0e-14
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Pol protein integrase region 2.051e-40
Internal
sp_v3.0_unigene56014 SustainPine v3.0 460
• AutoFact: reverse transcriptase [Taxus baccata] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene56141 SustainPine v3.0 474
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.699e-27
Putative Complete
sp_v3.0_unigene56226 SustainPine v3.0 409
• AutoFact: PREDICTED: similar to retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Vitis vinifera RepID=UPI000198569A 9.0e-24
• FL-Next: tr=Retrotransposon protein; Beta vulgaris (Sugar beet). 0.0
Internal
sp_v3.0_unigene56380 SustainPine v3.0 413
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-30
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain