Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon gag protein

Term: IPR005162  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8721 SustainPine v3.0 1005
AutoFact: Nckap1 domain containing protein 0.0
FL-Next: Isoform 2 of Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 0.0
Sma3: Nck-associated protein 1 2.944e-13
Internal
sp_v3.0_unigene8836 SustainPine v3.0 3936
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.6e-31
Complete
sp_v3.0_unigene9221 SustainPine v3.0 881
AutoFact: Trans-cinnamate 4-hydroxylase n=2 Tax=Pinaceae RepID=Q9XEH8_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamic acid 4-hydroxylase 0.0
C-terminus
sp_v3.0_unigene9445 SustainPine v3.0 3081
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1J0_RICCO 0.0
FL-Next: tr=Lipid binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Kinase-START domain protein 1.751e-08
Complete
sp_v3.0_unigene9770 SustainPine v3.0 910
AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 5.0e-21
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Gag-Pol polyprotein 6.554e-13
Putative N-terminus
sp_v3.0_unigene9875 SustainPine v3.0 323
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D1I7_LACBS 2.0e-24
FL-Next: sp=Lysine--tRNA ligase; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Lysyl-tRNA synthetase 0.0
C-terminus
sp_v3.0_unigene10334 SustainPine v3.0 3686
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.759e-13
Complete
sp_v3.0_unigene10387 SustainPine v3.0 785
AutoFact: FK506-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R9N7_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 5.796e-21
C-terminus
sp_v3.0_unigene10456 SustainPine v3.0 2937
AutoFact: RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb|CAH40786.1| PDR-like ABC transporter [Nicotiana plumbaginifolia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Complete
sp_v3.0_unigene10564 SustainPine v3.0 2326
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.375e-21
C-terminus
sp_v3.0_unigene11145 SustainPine v3.0 1798
AutoFact: Contains similarity to gb|Y13720 Hap2a transcription factor from Arabidopsis thaliana 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 3.757e-13
Putative Complete
sp_v3.0_unigene11240 SustainPine v3.0 3090
AutoFact: putative PDR-like ABC transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative Complete
sp_v3.0_unigene11316 SustainPine v3.0 2168
AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transcription factor Y subunit A-3 6.06e-10
Complete
sp_v3.0_unigene11471 SustainPine v3.0 1086
AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] sp|Q9FMY1.1|C86B1_ARATH RecName: Full=Cytochrome P450 86B1 gb|AAK29622.1|AF345898_1 CYP86B1 [Arabidopsis thaliana] dbj|BAB11174.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN72056.1| cytochrome P4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 5.29e-26
C-terminus
sp_v3.0_unigene11658 SustainPine v3.0 1758
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Receptor protein kinase CLAVATA1, putative 9.828e-20
Putative N-terminus
sp_v3.0_unigene11811 SustainPine v3.0 1356
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene11823 SustainPine v3.0 1116
AutoFact: receptor-like protein kinase 1 [Glycine max] 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 4.47e-14
N-terminus
sp_v3.0_unigene11958 SustainPine v3.0 2004
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12466 SustainPine v3.0 762
AutoFact: putative Mlo (pathogen resistance) protein [Oryza sativa Japonica Group] gb|EEE51332.1| hypothetical protein OsJ_32315 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein MLO, putative 3.598e-28
Putative C-terminus
sp_v3.0_unigene12604 SustainPine v3.0 537
AutoFact: receptor-like kinase LRK10 [Hordeum vulgare subsp. vulgare] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rust resistance kinase Lr10 7.776e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain