Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9803 SustainPine v3.0 646
• AutoFact: Triacylglycerol lipase n=2 Tax=Arabidopsis thaliana RepID=F4JT30_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein At4g13550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene9831 SustainPine v3.0 2609
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.888e-16
Complete
sp_v3.0_unigene9842 SustainPine v3.0 955
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RIU7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 6.701e-30
C-terminus
sp_v3.0_unigene9945 SustainPine v3.0 3307
• AutoFact: Raffinose_syn domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Seed imbibition protein 9.15e-15
Complete
sp_v3.0_unigene10000 SustainPine v3.0 2097
• AutoFact: putative casein kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase, putative 6.141e-16
Putative Complete
sp_v3.0_unigene10002 SustainPine v3.0 1614
• AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 2.825e-21
Complete
sp_v3.0_unigene10022 SustainPine v3.0 2336
• AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 3.584e-07
Complete
sp_v3.0_unigene10195 SustainPine v3.0 3019
• AutoFact: putative casein kinase [Oryza sativa Japonica Group] gb|AAV59374.1| putative casein kinase [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Casein kinase, putative 1.206e-18
Complete
sp_v3.0_unigene10231 SustainPine v3.0 1171
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.482e-29
C-terminus
sp_v3.0_unigene10334 SustainPine v3.0 3686
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.759e-13
Complete
sp_v3.0_unigene10366 SustainPine v3.0 366
• AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 1.065e-30
Internal
sp_v3.0_unigene10456 SustainPine v3.0 2937
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb|CAH40786.1| PDR-like ABC transporter [Nicotiana plumbaginifolia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Complete
sp_v3.0_unigene10478 SustainPine v3.0 1326
• AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AAA-type ATPase family protein, putative, expressed 1.952e-07
Complete
sp_v3.0_unigene10481 SustainPine v3.0 3864
• AutoFact: IBN_N domain containing protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative transportin 8.893e-09
Complete
sp_v3.0_unigene10550 SustainPine v3.0 471
• AutoFact: Os07g0575600 protein n=2 Tax=Oryza sativa RepID=Q8LIP2_ORYSJ 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_115, whole genome shotgun sequence 7.182e-08
Internal
sp_v3.0_unigene10556 SustainPine v3.0 470
• AutoFact: Nucleotid_trans domain containing protein 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative regulatory protein 2.543e-13
Putative C-terminus
sp_v3.0_unigene10571 SustainPine v3.0 1373
• AutoFact: pfam01432, Peptidase_M3, Peptidase family M3 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene10593 SustainPine v3.0 669
• AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.941e-26
Internal
sp_v3.0_unigene10637 SustainPine v3.0 1004
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12300, mitochondrial; Flags: Precursor dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr14 scaffold_190, whole genome shotgun sequence 1.373e-10
C-terminus
sp_v3.0_unigene10728 SustainPine v3.0 1045
• AutoFact: rve domain containing protein 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain