Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, integral membrane type 1

Term: IPR017940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene163723 SustainPine v3.0 239
AutoFact: MRP-like ABC transporter n=4 Tax=Oryza sativa RepID=Q8GU64_ORYSJ 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 4.209e-14
C-terminus
sp_v3.0_unigene163873 SustainPine v3.0 275
AutoFact: ABC transporter B family member 18 n=2 Tax=Arabidopsis RepID=AB18B_ARATH 3.0e-31
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene164024 SustainPine v3.0 231
AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 1.0e-18
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein 1, 2, putative 4.504e-14
Internal
sp_v3.0_unigene164034 SustainPine v3.0 161
AutoFact: DUF659 domain containing protein 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 6.292e-06
Internal
sp_v3.0_unigene164044 SustainPine v3.0 404
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U026_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
N-terminus
sp_v3.0_unigene164125 SustainPine v3.0 374
AutoFact: DUF659 domain containing protein 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT family dimerisation domain containing protein 2.101e-09
Internal
sp_v3.0_unigene164186 SustainPine v3.0 370
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 6.0e-31
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene165046 SustainPine v3.0 162
AutoFact: Multidrug resistance-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RGL4_RICCO 2.0e-18
FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165136 SustainPine v3.0 272
AutoFact: DUF659 domain containing protein 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene165218 SustainPine v3.0 141
AutoFact: ABC transporter C family member 14 n=3 Tax=Arabidopsis RepID=AB14C_ARATH 2.0e-08
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165598 SustainPine v3.0 202
AutoFact: DUF659 domain containing protein 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 4.188e-06
Putative C-terminus
sp_v3.0_unigene166022 SustainPine v3.0 471
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IN63_POPTR 1.0e-15
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene166246 SustainPine v3.0 475
AutoFact: Unassigned protein
FL-Next: sp=ABC transporter C family member 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance protein ABC transporter family 7.565e-09
N-terminus
sp_v3.0_unigene166296 SustainPine v3.0 454
AutoFact: ABC transporter C family member 14 n=3 Tax=Arabidopsis RepID=AB14C_ARATH 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative Complete
sp_v3.0_unigene166932 SustainPine v3.0 167
AutoFact: DUF659 domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene167320 SustainPine v3.0 196
AutoFact: multidrug-resistance related protein [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative N-terminus
sp_v3.0_unigene167381 SustainPine v3.0 126
AutoFact: ATP-binding cassette transporter, subfamily C, member 4, group MRP protein PpABCC4 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SV23_PHYPA 1.0e-12
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance protein ABC transporter family 0.0
Internal
sp_v3.0_unigene167728 SustainPine v3.0 194
AutoFact: histone-lysine N-methyltransferase ATX3 [Arabidopsis thaliana] sp|Q9M364.2|ATX3_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX3; AltName: Full=Protein SET DOMAIN GROUP 14; AltName: Full=Trithorax-homolog protein 3; Short=TRX-homolog protein 3 6.0e-12
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Trithorax, putative 1.443e-08
Internal
sp_v3.0_unigene167829 SustainPine v3.0 306
AutoFact: ATP-binding cassette transporter, subfamily D, member 2, group PMP protein PpABCD2 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SSI7_PHYPA 1.0e-20
FL-Next: sp=ABC transporter D family member 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene168093 SustainPine v3.0 254
AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative n=1 Tax=Ricinus communis RepID=B9SAP4_RICCO 3.0e-30
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Sma3: Multidrug resistance protein ABC transporter family 5.108e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain