Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63159 SustainPine v3.0 286
• AutoFact: ATP-binding cassette transporter, subfamily C, member 6, SmABCC6 n=2 Tax=Selaginella moellendorffii RepID=D8RPR3_SELML 3.0e-25
• FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Internal
sp_v3.0_unigene63435 SustainPine v3.0 260
• AutoFact: multi-drug resistance protein [Arabidopsis thaliana] 3.0e-30
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.167e-06
Internal
sp_v3.0_unigene63936 SustainPine v3.0 164
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.552e-06
Putative C-terminus
sp_v3.0_unigene64440 SustainPine v3.0 182
• AutoFact: ATP-binding cassette transporter (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8QNX3_SELML 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64482 SustainPine v3.0 201
• AutoFact: PREDICTED: similar to Multidrug Resistance associated Protein 1 n=1 Tax=Vitis vinifera RepID=UPI00019840F2 3.0e-13
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65101 SustainPine v3.0 201
• AutoFact: MDR-like ABC transporter n=4 Tax=Oryza sativa RepID=Q8GU69_ORYSJ 4.0e-05
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 1.146e-12
Internal
sp_v3.0_unigene65145 SustainPine v3.0 147
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 6.0e-09
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Chromosome undetermined scaffold_143, whole genome shotgun sequence 5.892e-11
Internal
sp_v3.0_unigene65309 SustainPine v3.0 173
• AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65336 SustainPine v3.0 163
• AutoFact: ATP-binding cassette transporter, subfamily C, member 8, group MRP protein PpABCC8 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SZM0_PHYPA 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 0.0
Putative N-terminus
sp_v3.0_unigene65371 SustainPine v3.0 212
• AutoFact: multidrug resistance-associated protein (MRP)-like; ABC-transporter-like protein [Arabidopsis thaliana] 1.0e-18
• FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
• Sma3: Multidrug resistance protein ABC transporter family 4.19689e-42
Internal
sp_v3.0_unigene65416 SustainPine v3.0 175
• AutoFact: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T8Y6_RICCO 6.0e-14
• FL-Next: Isoform 2 of ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 0.0
• Sma3: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative 7.375e-15
Internal
sp_v3.0_unigene65706 SustainPine v3.0 115
• AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 8.0e-06
• FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Internal
sp_v3.0_unigene65720 SustainPine v3.0 178
• AutoFact: Cysteine protease-like protein n=1 Tax=Arachis hypogaea RepID=B7UCQ3_ARAHY 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 1.611e-35
Internal
sp_v3.0_unigene65722 SustainPine v3.0 137
• AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 2.0e-08
• FL-Next: sp=ABC transporter B family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65766 SustainPine v3.0 235
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IJZ6_POPTR 1.0e-17
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 4.116e-21
Internal
sp_v3.0_unigene66639 SustainPine v3.0 441
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IN63_POPTR 2.0e-09
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene67670 SustainPine v3.0 366
• AutoFact: Papain-like cysteine proteinase n=1 Tax=Hordeum vulgare subsp. vulgare RepID=B4ESE4_HORVD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cysteine proteinase 1.79e-40
C-terminus
sp_v3.0_unigene69340 SustainPine v3.0 259
• AutoFact: P-glycoprotein 9 n=2 Tax=Arabidopsis RepID=F4JQQ3_ARATH 2.0e-25
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene69544 SustainPine v3.0 204
• AutoFact: Unassigned protein
• FL-Next: sp=Putative multidrug resistance protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: P-glycoprotein 1.733e-06
Internal
sp_v3.0_unigene69909 SustainPine v3.0 142
• AutoFact: MDR-like ABC transporter n=6 Tax=Poaceae RepID=Q9LGX1_ORYSJ 3.0e-07
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Chromosome undetermined scaffold_143, whole genome shotgun sequence 3.021e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain