Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57929 SustainPine v3.0 99
• AutoFact: ABC transporter B family member 20 [Arabidopsis thaliana] sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC transporter B family member 20; Short=ABC transporter ABCB.20; Short=AtABCB20; AltName: Full=Multidrug resistance protein 14; AltName: Full=P-glycoprotein 1.0e-06
• FL-Next: sp=ABC transporter B family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 3.821e-06
Internal
sp_v3.0_unigene58284 SustainPine v3.0 328
• AutoFact: Multidrug resistance-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RGL4_RICCO 9.0e-39
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene58702 SustainPine v3.0 441
• AutoFact: ABC transporter B family member 20 [Arabidopsis thaliana] sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC transporter B family member 20; Short=ABC transporter ABCB.20; Short=AtABCB20; AltName: Full=Multidrug resistance protein 14; AltName: Full=P-glycoprotein 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 5.669e-06
Internal
sp_v3.0_unigene58960 SustainPine v3.0 169
• AutoFact: ATP-binding cassette transporter, subfamily C, member 5, SmABCC5 n=2 Tax=Selaginella moellendorffii RepID=D8REF1_SELML 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance-associated protein 2, 6 (Mrp2, 6), abc-transoprter, putative 2.033e-23
Internal
sp_v3.0_unigene59160 SustainPine v3.0 225
• AutoFact: MRP-like ABC transporter [Arabidopsis thaliana] 3.0e-21
• FL-Next: sp=ABC transporter C family member 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.861e-18
Internal
sp_v3.0_unigene59348 SustainPine v3.0 242
• AutoFact: ATP-binding cassette transporter, subfamily C, member 1, group MRP protein PpABCC1 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SUU8_PHYPA 3.0e-22
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene59458 SustainPine v3.0 355
• AutoFact: multidrug resistance p-glycoprotein; ABC transporter-like protein [Arabidopsis thaliana] 7.0e-24
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 2.929e-06
Internal
sp_v3.0_unigene59769 SustainPine v3.0 369
• AutoFact: ATP-binding cassette transporter, subfamily C, member 5, SmABCC5 n=2 Tax=Selaginella moellendorffii RepID=D8REF1_SELML 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.778e-11
Putative C-terminus
sp_v3.0_unigene60543 SustainPine v3.0 319
• AutoFact: Isoform 2 of ABC transporter C family member 3 n=1 Tax=Arabidopsis thaliana RepID=Q9LK64-2 2.0e-21
• FL-Next: Isoform 2 of ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 0.0
• Sma3: Multidrug resistance protein ABC transporter family 5.356e-16
Internal
sp_v3.0_unigene60792 SustainPine v3.0 295
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 1.16e-14
C-terminus
sp_v3.0_unigene61559 SustainPine v3.0 274
• AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 2.0e-24
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene61953 SustainPine v3.0 209
• AutoFact: MRP-like ABC transporter [Oryza sativa Japonica Group] 1.0e-09
• FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 2.258e-10
Internal
sp_v3.0_unigene62209 SustainPine v3.0 273
• AutoFact: RecName: Full=Putative multidrug resistance protein; AltName: Full=P-glycoprotein dbj|BAD16475.1| putative multidrug resistance p-glycoprotein [Oryza sativa Japonica Group] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 2.784e-12
Putative Complete
sp_v3.0_unigene62285 SustainPine v3.0 295
• AutoFact: Multidrug resistance-associated protein, putative n=1 Tax=Ricinus communis RepID=B9RGL4_RICCO 6.0e-29
• FL-Next: sp=ABC transporter C family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene62388 SustainPine v3.0 177
• AutoFact: Unassigned protein 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene62566 SustainPine v3.0 139
• AutoFact: ATP-binding cassette transporter, subfamily C, member 12, group MRP protein PpABCC12 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4V1_PHYPA 3.0e-09
• FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette transporter, subfamily C, member 12, group MRP protein PpABCC12 6.823e-06
Internal
sp_v3.0_unigene62621 SustainPine v3.0 255
• AutoFact: ABC transporter, putative [Oryza sativa Japonica Group] gb|EEE51671.1| hypothetical protein OsJ_33016 [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug resistance protein ABC transporter family 5.86e-14
Internal
sp_v3.0_unigene62745 SustainPine v3.0 116
• AutoFact: Unassigned protein 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62833 SustainPine v3.0 166
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IN61_POPTR 4.0e-16
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene63154 SustainPine v3.0 191
• AutoFact: Multidrug resistance protein 1, 2, putative n=1 Tax=Ricinus communis RepID=B9RUH8_RICCO 2.0e-13
• FL-Next: sp=Putative multidrug resistance protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: P-glycoprotein 1.733e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain