Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166020 SustainPine v3.0 418
• AutoFact: SCF ubiquitin ligase n=4 Tax=Agaricomycetes RepID=A8NE72_COPC7 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Skp1, putative 8.301e-11
N-terminus
sp_v3.0_unigene166184 SustainPine v3.0 193
• AutoFact: 4-coumarate:CoA ligase n=2 Tax=Populus trichocarpa RepID=B2Z6P2_POPTR 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyl:coa ligase 5.336e-35
Internal
sp_v3.0_unigene166483 SustainPine v3.0 216
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166551 SustainPine v3.0 415
• AutoFact: Zinc ion binding protein n=3 Tax=Arabidopsis thaliana RepID=F4JXJ5_ARATH 1.0e-12
• FL-Next: tr=Putative uncharacterized protein At5g65740/MPA24_9; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene166913 SustainPine v3.0 439
• AutoFact: RNA ligase isoform 2 [Triticum aestivum] 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167639 SustainPine v3.0 159
• AutoFact: 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168172 SustainPine v3.0 276
• AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 1.077e-13
Internal
sp_v3.0_unigene183625 SustainPine v3.0 480
• AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 1.0e-34
• FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GH3 family protein 8.572e-24
C-terminus
sp_v3.0_unigene185955 SustainPine v3.0 161
• AutoFact: putative E3 ubiquitin-protein ligase XBAT31 [Arabidopsis thaliana] sp|Q94B55.1|XB31_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase XBAT31; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT31; AltName: Full=Protein XB3 h 5.0e-11
• FL-Next: sp=Putative E3 ubiquitin-protein ligase XBAT31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene185988 SustainPine v3.0 545
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 5.406e-23
Complete
sp_v3.0_unigene186722 SustainPine v3.0 1239
• AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 1.579e-23
Putative Complete
sp_v3.0_unigene188968 SustainPine v3.0 494
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 7.544e-23
Putative Complete
sp_v3.0_unigene189513 SustainPine v3.0 667
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 8.007e-23
Complete
sp_v3.0_unigene191700 SustainPine v3.0 501
• AutoFact: Ubiquitin-activating enzyme E1 (Fragment) n=1 Tax=Pediculus humanus corporis RepID=E0VPA2_PEDHC 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene192341 SustainPine v3.0 533
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 4.935e-23
Complete
sp_v3.0_unigene192390 SustainPine v3.0 699
• AutoFact: S-phase kinase-associated protein 1A n=2 Tax=root RepID=D0MV20_PHYIT 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinetochore protein 1.238e-12
Complete
sp_v3.0_unigene192667 SustainPine v3.0 439
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192883 SustainPine v3.0 341
• AutoFact: Cullin-3 n=1 Tax=Dictyostelium discoideum RepID=CUL3_DICDI 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cullin 1.233e-10
C-terminus
sp_v3.0_unigene193479 SustainPine v3.0 439
• AutoFact: Beta chain succinyl-coa synthetase synthetase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXA2_PHATC 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Succinyl-CoA synthetase beta chain 7.738e-09
C-terminus
sp_v3.0_unigene194850 SustainPine v3.0 312
• AutoFact: Acyl:coa ligase acetate-coa synthetase-like protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H653_POPTR 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AMP dependent ligase, putative 1.987e-30
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain