Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: E3 ubiquitin ligase, SCF complex, Skp subunit

Term: IPR016897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18128 SustainPine v3.0 1328
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SCF ubiquitin ligase 0.0
Complete
sp_v3.0_unigene18272 SustainPine v3.0 842
AutoFact: SKP1 n=1 Tax=Pellia endiviifolia (species B) RepID=C9WCK3_9MARC 5.0e-39
FL-Next: sp=SKP1-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Fimbriata-associated protein 1.421e-16
Complete
sp_v3.0_unigene26145 SustainPine v3.0 436
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 2.715e-17
N-terminus
sp_v3.0_unigene32874 SustainPine v3.0 633
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.917e-23
Complete
sp_v3.0_unigene58385 SustainPine v3.0 404
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene58627 SustainPine v3.0 463
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinetochore protein 1.071e-14
Putative Complete
sp_v3.0_unigene65834 SustainPine v3.0 131
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.379e-24
Internal
sp_v3.0_unigene67352 SustainPine v3.0 219
AutoFact: Fimbriata-associated protein (Fragment) n=1 Tax=Plantago major RepID=Q1EMN7_PLAMJ 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.051e-24
C-terminus
sp_v3.0_unigene69791 SustainPine v3.0 209
AutoFact: Skp1 domain containing protein 3.0e-20
Sma3: Fimbriata-associated protein 1.585e-24
unknown
sp_v3.0_unigene75418 SustainPine v3.0 337
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 2.74e-23
N-terminus
sp_v3.0_unigene78167 SustainPine v3.0 208
AutoFact: Skp1 n=1 Tax=Physarum polycephalum RepID=Q95UI9_PHYPO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 6.551e-25
Internal
sp_v3.0_unigene80863 SustainPine v3.0 189
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 4.0e-08
FL-Next: tr=SCF ubiquitin ligase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Fimbriata-associated protein 6.589e-24
C-terminus
sp_v3.0_unigene144892 SustainPine v3.0 289
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 7.0e-15
FL-Next: tr=SCF ubiquitin ligase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Fimbriata-associated protein 5.936e-24
C-terminus
sp_v3.0_unigene150315 SustainPine v3.0 165
AutoFact: Fimbriata-associated protein (Fragment) n=1 Tax=Antirrhinum majus RepID=O48570_ANTMA 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 2.958e-12
Internal
sp_v3.0_unigene150929 SustainPine v3.0 372
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.076e-23
Internal
sp_v3.0_unigene152585 SustainPine v3.0 358
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 8.494e-23
C-terminus
sp_v3.0_unigene153002 SustainPine v3.0 155
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 3.51e-24
Internal
sp_v3.0_unigene153544 SustainPine v3.0 347
AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 1.48e-17
N-terminus
sp_v3.0_unigene153558 SustainPine v3.0 393
AutoFact: Skp1 family protein [Cryptosporidium parvum Iowa II] gb|EAZ51579.1| Skp1 family protein, putative [Cryptosporidium parvum Iowa II] 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 5.834e-23
C-terminus
sp_v3.0_unigene155068 SustainPine v3.0 372
AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata-associated protein 4.664e-23
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain