Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Rubber elongation factor

Term: IPR008802  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2086 SustainPine v3.0 1259
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene4849 SustainPine v3.0 364
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene5034 SustainPine v3.0 435
AutoFact: REF domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene17643 SustainPine v3.0 1406
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18061 SustainPine v3.0 961
AutoFact: pfam05755, REF, Rubber elongation factor protein (REF) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29732 SustainPine v3.0 1174
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30494 SustainPine v3.0 1496
AutoFact: Rubber elongation factor protein, putative n=1 Tax=Ricinus communis RepID=B9RFA8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32908 SustainPine v3.0 1164
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34169 SustainPine v3.0 1260
AutoFact: Rubber elongation factor protein, putative n=1 Tax=Ricinus communis RepID=B9RFA8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene46763 SustainPine v3.0 430
AutoFact: zf-CHY multi-domain protein 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CHY zinc finger family protein, expressed 2.067e-07
N-terminus
sp_v3.0_unigene52397 SustainPine v3.0 222
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65652 SustainPine v3.0 189
AutoFact: Small rubber particle protein (Fragment) n=1 Tax=Hevea brasiliensis RepID=Q84T87_HEVBR 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73850 SustainPine v3.0 328
AutoFact: Stress-related protein n=3 Tax=Vitis RepID=SRP_VITRI 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene77377 SustainPine v3.0 361
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stress-related protein 1.723e-13
Putative N-terminus
sp_v3.0_unigene105428 SustainPine v3.0 880
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene127338 SustainPine v3.0 380
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene129623 SustainPine v3.0 647
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene133441 SustainPine v3.0 286
AutoFact: REF domain containing protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene139620 SustainPine v3.0 439
AutoFact: RecName: Full=Stress-related protein gb|AAD51854.1|AF178990_1 stress related protein [Vitis riparia] 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141289 SustainPine v3.0 519
AutoFact: Rubber elongation factor n=1 Tax=Morus alba RepID=C9E7B4_MORAL 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain