Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Derlin

Term: IPR007599  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene978 SustainPine v3.0 1787
AutoFact: putative Der1-like family protein [Cynodon dactylon] 0.0
FL-Next: sp=Derlin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Derlin-3 2.544e-09
Complete
sp_v3.0_unigene9549 SustainPine v3.0 1431
AutoFact: UBA-like n=2 Tax=Medicago truncatula RepID=Q2HSZ5_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14006 SustainPine v3.0 959
AutoFact: UBA-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UBA/TS-N domain 1.696e-09
C-terminus
sp_v3.0_unigene16599 SustainPine v3.0 1567
AutoFact: Derlin-2, putative n=4 Tax=rosids RepID=B9RXN5_RICCO 0.0
FL-Next: sp=Derlin-2.1; Zea mays (Maize). 0.0
Sma3: Derlin-2, putative 0.0
Complete
sp_v3.0_unigene17255 SustainPine v3.0 1644
AutoFact: Ubiquitin-associated (UBA) protein [Arabidopsis thaliana] emb|CAC00737.1| putative protein [Arabidopsis thaliana] gb|AAM63026.1| unknown [Arabidopsis thaliana] gb|AAO63279.1| At3g56740 [Arabidopsis thaliana] dbj|BAE99920.1| hypothetical protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UBA/TS-N domain 1.463e-09
Complete
sp_v3.0_unigene32132 SustainPine v3.0 629
AutoFact: Derlin-1 n=2 Tax=Arabidopsis RepID=DERL1_ARATH 0.0
FL-Next: sp=Derlin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Derlin-3 2.032e-09
N-terminus
sp_v3.0_unigene131656 SustainPine v3.0 540
AutoFact: putative Der1-like family protein [Cynodon dactylon] 2.0e-22
FL-Next: sp=Derlin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene141977 SustainPine v3.0 513
AutoFact: Derlin-2, putative n=1 Tax=Ricinus communis RepID=B9T8V1_RICCO 2.0e-37
FL-Next: sp=Derlin-1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Derlin-3 8.982e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain