|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene1665
|
SustainPine v3.0
|
1273
|
|
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
1.426e-09
|
|
C-terminus
|
|
sp_v3.0_unigene1932
|
SustainPine v3.0
|
3083
|
|
• AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene3277
|
SustainPine v3.0
|
666
|
|
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
7.054e-10
|
|
Internal
|
|
sp_v3.0_unigene6555
|
SustainPine v3.0
|
2950
|
|
• AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: CPSF A subunit, C-terminal
|
3.006e-09
|
|
Complete
|
|
sp_v3.0_unigene12571
|
SustainPine v3.0
|
677
|
|
• AutoFact: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [Arabidopsis thaliana] gb|AAP04148.1| unknown protein [Arabidopsis thaliana] dbj|BAF01468.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75129.1| Cleavage and polyadenylation s
|
0.0
|
|
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene15138
|
SustainPine v3.0
|
4085
|
|
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Chromosome chr10 scaffold_43, whole genome shotgun sequence
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene15598
|
SustainPine v3.0
|
666
|
|
• AutoFact: MMS1_N domain containing protein
|
1.0e-12
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene48054
|
SustainPine v3.0
|
665
|
|
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
5.586e-10
|
|
Internal
|
|
sp_v3.0_unigene51629
|
SustainPine v3.0
|
434
|
|
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana]
|
3.0e-28
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Cleavage and polyadenylation specificity factor cpsf, putative
|
6.823e-06
|
|
Internal
|
|
sp_v3.0_unigene54253
|
SustainPine v3.0
|
463
|
|
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE
|
0.0
|
|
• FL-Next: sp=DNA damage-binding protein 1; cheesmanii).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene56328
|
SustainPine v3.0
|
484
|
|
• AutoFact: putative cleavage and polyadenylation specificity factor 160 kDa subunit [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
7.054e-10
|
|
Internal
|
|
sp_v3.0_unigene61635
|
SustainPine v3.0
|
181
|
|
• AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH
|
4.0e-07
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Putative cleavage and polyadenylation specificity factor 160 kDa subunit
|
8.285e-06
|
|
N-terminus
|
|
sp_v3.0_unigene64994
|
SustainPine v3.0
|
242
|
|
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
|
3.0e-17
|
|
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
5.586e-10
|
|
Internal
|
|
sp_v3.0_unigene65243
|
SustainPine v3.0
|
184
|
|
• AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group]
|
2.0e-05
|
|
• FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
7.852e-10
|
|
Internal
|
|
sp_v3.0_unigene65698
|
SustainPine v3.0
|
151
|
|
• AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79
|
7.0e-15
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Sma3: CPSF A subunit, C-terminal
|
1.019e-09
|
|
Internal
|
|
sp_v3.0_unigene68605
|
SustainPine v3.0
|
216
|
|
• AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79
|
2.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene94888
|
SustainPine v3.0
|
434
|
|
• AutoFact: putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica Group] dbj|BAD10521.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica Group] gb|EAY84395.1| hypothetical protein OsI_05771 [Oryza sativa Indica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene95056
|
SustainPine v3.0
|
481
|
|
• AutoFact: Spliceosomal protein sap, putative n=1 Tax=Ricinus communis RepID=B9T017_RICCO
|
9.0e-37
|
|
• FL-Next: tr=Spliceosomal protein sap, putative; Ricinus communis (Castor bean).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene98724
|
SustainPine v3.0
|
1022
|
|
• AutoFact: Cleavage and polyadenylation specificity factor subunit 1 n=2 Tax=Arabidopsis RepID=CPSF1_ARATH
|
0.0
|
|
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Probable cleavage and polyadenylation specificity factor subunit 1
|
1.656e-09
|
|
Internal
|
|
sp_v3.0_unigene101438
|
SustainPine v3.0
|
565
|
|
• AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79
|
5.60519e-45
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
N-terminus
|
