Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene87 SustainPine v3.0 1726
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.5e-17
Putative N-terminus
sp_v3.0_unigene124 SustainPine v3.0 1465
unknown
sp_v3.0_unigene263 SustainPine v3.0 2184
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.765e-09
Putative Complete
sp_v3.0_unigene624 SustainPine v3.0 2918
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.062e-11
C-terminus
sp_v3.0_unigene625 SustainPine v3.0 301
AutoFact: WD-40 repeat protein-like (Fragment) n=1 Tax=Populus suaveolens RepID=Q1HIU4_9ROSI 3.0e-15
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.815e-07
Internal
sp_v3.0_unigene654 SustainPine v3.0 1453
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.547e-09
Putative C-terminus
sp_v3.0_unigene681 SustainPine v3.0 1639
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene1112 SustainPine v3.0 604
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.548e-09
Internal
sp_v3.0_unigene1345 SustainPine v3.0 2696
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FHS6.1|FK119_ARATH RecName: Full=F-box/kelch-repeat protein At5g43190 dbj|BAB10582.1| unnamed protein product [Arabidopsis thaliana] gb|AAO23649.1| At5g43190 [Arabidopsis thaliana] dbj|BAE99583.1| hyp 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene2053 SustainPine v3.0 1966
AutoFact: Glycosyltransferase, CAZy family GT4 n=1 Tax=Selaginella moellendorffii RepID=D8QWP9_SELML 0.0
FL-Next: tr=Glycosyltransferase, CAZy family GT4; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Glycosyltransferase, putative 4.353e-10
Complete
sp_v3.0_unigene2100 SustainPine v3.0 1181
AutoFact: glycosyl transferase family 1 protein [Arabidopsis thaliana] gb|AED97137.1| glycosyl transferase family 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Glycosyltransferase, putative 4.353e-10
C-terminus
sp_v3.0_unigene2341 SustainPine v3.0 459
AutoFact: AAA ATPase, central region; L-lactate dehydrogenase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 2.38e-13
Internal
sp_v3.0_unigene2460 SustainPine v3.0 2779
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9LFV5.1|FK111_ARATH RecName: Full=F-box/kelch-repeat protein At5g15710 emb|CAC01770.1| putative protein [Arabidopsis thaliana] gb|AAR92279.1| At5g15710 [Arabidopsis thaliana] gb|AAS99683.1| At5g15710 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene2528 SustainPine v3.0 3957
AutoFact: lipin-like protein [Arabidopsis thaliana] ref|NP_974268.1| lipin-like protein [Arabidopsis thaliana] ref|NP_001118604.1| lipin-like protein [Arabidopsis thaliana] gb|AAF23287.1|AC016661_12 unknown protein [Arabidopsis thaliana] gb|AEE74780.1| lipin-like p 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene2637 SustainPine v3.0 1214
AutoFact: High mobility group protein n=1 Tax=Cucumis sativus RepID=Q4ZH67_CUCSA 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 3.337e-25
Complete
sp_v3.0_unigene2753 SustainPine v3.0 5002
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.451e-11
Complete
sp_v3.0_unigene3276 SustainPine v3.0 2828
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SJ92_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance pump, putative 5.046e-09
Complete
sp_v3.0_unigene4623 SustainPine v3.0 396
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene4667 SustainPine v3.0 319
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.468e-31
Internal
sp_v3.0_unigene4702 SustainPine v3.0 487
AutoFact: HMG-protein [Plantago major] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HMG1/2-like protein 5.394e-21
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain