Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40424 SustainPine v3.0 1782
AutoFact: Acyl_transf_3 multi-domain protein 1.0e-05
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-40 repeat protein-like 2.6e-07
Internal
sp_v3.0_unigene40428 SustainPine v3.0 508
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 5.0e-25
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.045e-07
Internal
sp_v3.0_unigene40431 SustainPine v3.0 1293
AutoFact: WD-repeat protein, putative 0.0
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 6.153e-12
Internal
sp_v3.0_unigene40433 SustainPine v3.0 1607
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.702e-07
C-terminus
sp_v3.0_unigene40437 SustainPine v3.0 455
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 1.0e-23
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 1.688e-09
Internal
sp_v3.0_unigene40441 SustainPine v3.0 3245
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.168e-09
Putative Complete
sp_v3.0_unigene40442 SustainPine v3.0 1686
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.282e-07
Putative C-terminus
sp_v3.0_unigene40447 SustainPine v3.0 1210
AutoFact: Topless-related protein 3 [Arabidopsis thaliana] sp|Q84JM4.1|TPR3_ARATH RecName: Full=Topless-related protein 3 gb|AAO42071.1| unknown protein [Arabidopsis thaliana] gb|AAO50698.1| unknown protein [Arabidopsis thaliana] gb|AED93642.1| Topless-related prot 1.0e-20
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene40605 SustainPine v3.0 995
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.142e-18
Putative C-terminus
sp_v3.0_unigene40660 SustainPine v3.0 1121
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 7.615e-12
Putative C-terminus
sp_v3.0_unigene40943 SustainPine v3.0 564
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.658e-33
Internal
sp_v3.0_unigene41314 SustainPine v3.0 840
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.357e-12
Internal
sp_v3.0_unigene42288 SustainPine v3.0 1694
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.022e-14
Putative N-terminus
sp_v3.0_unigene42290 SustainPine v3.0 2773
AutoFact: rve domain containing protein 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.331e-16
Putative Complete
sp_v3.0_unigene42323 SustainPine v3.0 1581
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-06
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.13e-09
C-terminus
sp_v3.0_unigene42435 SustainPine v3.0 611
AutoFact: WD-40 repeat protein-like [Populus suaveolens] 3.99931e-42
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.28e-07
Internal
sp_v3.0_unigene42569 SustainPine v3.0 436
AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 5.60519e-45
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Sma3: WD-repeat protein, putative 2.282e-09
Internal
sp_v3.0_unigene42650 SustainPine v3.0 468
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.384e-09
Internal
sp_v3.0_unigene42934 SustainPine v3.0 437
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 1.451e-14
C-terminus
sp_v3.0_unigene43135 SustainPine v3.0 243
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-18
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 1.688e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain