Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4714 SustainPine v3.0 766
AutoFact: cytochrome P450, family 87, subfamily A, polypeptide 2 [Arabidopsis thaliana] gb|AAR24666.1| At1g12740 [Arabidopsis thaliana] dbj|BAD44087.1| hypothetical protein [Arabidopsis thaliana] gb|AEE28919.1| cytochrome P450, family 87, subfamily A, polypeptide 2 0.0
FL-Next: tr=Cytochrome P450 90A20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 1.777e-24
C-terminus
sp_v3.0_unigene6600 SustainPine v3.0 2097
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Multidrug resistance pump, putative 1.092e-08
C-terminus
sp_v3.0_unigene6683 SustainPine v3.0 850
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbriata 1.403e-34
C-terminus
sp_v3.0_unigene7893 SustainPine v3.0 1513
AutoFact: F-box family protein n=1 Tax=Citrus trifoliata RepID=B8Y9B5_PONTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 9.983e-09
Complete
sp_v3.0_unigene8710 SustainPine v3.0 862
AutoFact: SMC_N multi-domain protein 1.0e-11
FL-Next: sp=Uncharacterized protein At1g10890; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene8714 SustainPine v3.0 1309
AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AAA ATPase, central region 3.222e-07
C-terminus
sp_v3.0_unigene10763 SustainPine v3.0 1330
AutoFact: DUF1777 multi-domain protein 1.0e-14
unknown
sp_v3.0_unigene10798 SustainPine v3.0 1812
AutoFact: F-box multi-domain protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12100 SustainPine v3.0 636
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene12214 SustainPine v3.0 973
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 4.54e-11
Putative C-terminus
sp_v3.0_unigene12667 SustainPine v3.0 3184
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 7.938e-12
Putative Complete
sp_v3.0_unigene13079 SustainPine v3.0 1635
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 2.811e-09
Putative Complete
sp_v3.0_unigene13239 SustainPine v3.0 815
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
N-terminus
sp_v3.0_unigene15034 SustainPine v3.0 627
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.887e-12
N-terminus
sp_v3.0_unigene15827 SustainPine v3.0 544
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.354e-14
Internal
sp_v3.0_unigene16051 SustainPine v3.0 3042
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 7.867e-13
Complete
sp_v3.0_unigene16560 SustainPine v3.0 638
AutoFact: Cytochrome P450 A n=1 Tax=Capsicum annuum RepID=E3UTN3_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 2.796e-20
N-terminus
sp_v3.0_unigene17349 SustainPine v3.0 3114
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Beta transducin-like protein, putative 3.64e-08
Putative C-terminus
sp_v3.0_unigene17756 SustainPine v3.0 1416
AutoFact: F-box multi-domain protein 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18138 SustainPine v3.0 1573
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 8.705e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain