Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Plant specific eukaryotic initiation factor 4B

Term: IPR010433  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5358 SustainPine v3.0 2629
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic initiation factor 4B 9.207e-17
Putative Complete
sp_v3.0_unigene8457 SustainPine v3.0 2081
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene10476 SustainPine v3.0 1375
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U593_VITVI 0.0
FL-Next: tr=Extensin-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: At2g16630 8.285e-06
Complete
sp_v3.0_unigene17683 SustainPine v3.0 1532
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic initiation factor 4B 1.09e-16
C-terminus
sp_v3.0_unigene18077 SustainPine v3.0 740
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U593_VITVI 3.0e-22
FL-Next: tr=Pollen major allergen No.121 isoform 1; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: At2g16630 8.285e-06
N-terminus
sp_v3.0_unigene62440 SustainPine v3.0 294
AutoFact: Amidase family protein n=1 Tax=Solanum demissum RepID=Q94GC6_SOLDE 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amidase, putative 3.409e-21
Internal
sp_v3.0_unigene76996 SustainPine v3.0 271
AutoFact: Unassigned protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81687 SustainPine v3.0 211
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U593_VITVI 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene94083 SustainPine v3.0 399
AutoFact: eIF-4B domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 4B 1.71e-10
N-terminus
sp_v3.0_unigene126369 SustainPine v3.0 465
AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene142857 SustainPine v3.0 333
AutoFact: Unassigned protein 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene169019 SustainPine v3.0 271
AutoFact: Gly_rich multi-domain protein 7.0e-17
Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene208288 SustainPine v3.0 269
AutoFact: Amidase family protein [Solanum demissum] 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Amidase, putative 3.742e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain