Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chromosome chr9 scaffold_7, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6929 SustainPine v3.0 1492
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene73060 SustainPine v3.0 137
AutoFact: multidrug-resistance related protein [Arabidopsis thaliana] 5.0e-08
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 6.227e-06
Internal
sp_v3.0_unigene73442 SustainPine v3.0 203
AutoFact: RecName: Full=Pleiotropic drug resistance protein 12 dbj|BAD53545.1| PDR-like ABC transporter [Oryza sativa Japonica Group] gb|EEE65874.1| hypothetical protein OsJ_21675 [Oryza sativa Japonica Group] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 8.422e-06
Internal
sp_v3.0_unigene78442 SustainPine v3.0 352
AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 5.0e-24
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 7.588e-06
Internal
sp_v3.0_unigene79277 SustainPine v3.0 309
AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 7.0e-21
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 7.588e-06
Internal
sp_v3.0_unigene80029 SustainPine v3.0 250
AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 9.0e-16
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 2.544e-06
Internal
sp_v3.0_unigene99226 SustainPine v3.0 426
AutoFact: RecName: Full=Pleiotropic drug resistance protein 12 dbj|BAD53545.1| PDR-like ABC transporter [Oryza sativa Japonica Group] gb|EEE65874.1| hypothetical protein OsJ_21675 [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 5.815e-08
C-terminus
sp_v3.0_unigene100902 SustainPine v3.0 437
AutoFact: multidrug resistance protein associated1 [Zea mays] gb|AAO72315.1| multidrug resistance associated protein 1 [Zea mays] gb|AAO72316.1| multidrug resistance associated protein 1 [Zea mays] 3.0e-20
FL-Next: Isoform 2 of ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 5.162e-06
Internal
sp_v3.0_unigene106896 SustainPine v3.0 430
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF2_RICCO 4.0e-14
FL-Next: Isoform 2 of Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 0.0
Sma3: Chromosome chr9 scaffold_7, whole genome shotgun sequence 3.111e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain