Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12182 SustainPine v3.0 940
AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene12383 SustainPine v3.0 890
AutoFact: TATA-binding protein-associated factor MOT1, putative n=1 Tax=Ricinus communis RepID=B9SD95_RICCO 0.0
FL-Next: tr=TATA-binding protein-associated factor MOT1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene12523 SustainPine v3.0 591
AutoFact: Putative SNF2 domain-containing protein n=2 Tax=Oryza sativa RepID=Q6H7U1_ORYSJ 0.0
FL-Next: sp=Putative chromatin-remodeling complex ATPase chain; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 super family 2.889e-06
Internal
sp_v3.0_unigene12617 SustainPine v3.0 896
AutoFact: putative helicase [Arabidopsis thaliana] 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CarD-like transcriptional regulator family protein, expressed 4.361e-09
Complete
sp_v3.0_unigene13030 SustainPine v3.0 2005
AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 3.219e-09
Putative Complete
sp_v3.0_unigene13071 SustainPine v3.0 1369
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.39e-18
Internal
sp_v3.0_unigene13348 SustainPine v3.0 473
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene13576 SustainPine v3.0 380
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.47e-11
Internal
sp_v3.0_unigene13622 SustainPine v3.0 735
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AAK76494.1| putative helicase [Arabidopsis thaliana] gb|AAM15033.1| putative helicase [Arabidopsis thaliana] gb|AAD17447.2| putative helicase [Arabidopsis thaliana] gb|AAM14300.1| putative helicase [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein smubp-2, putative 5.237e-09
Internal
sp_v3.0_unigene13761 SustainPine v3.0 1216
AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 1.025e-12
Complete
sp_v3.0_unigene13858 SustainPine v3.0 5064
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Katanin p60 ATPase-containing subunit, putative 3.36e-07
Complete
sp_v3.0_unigene14334 SustainPine v3.0 517
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 9.009e-07
Internal
sp_v3.0_unigene14394 SustainPine v3.0 638
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 2.667e-11
C-terminus
sp_v3.0_unigene14658 SustainPine v3.0 1789
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA helicase-like 3.335e-09
C-terminus
sp_v3.0_unigene14672 SustainPine v3.0 1280
AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 0.0
FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene14909 SustainPine v3.0 378
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative DNA2-NAM7 helicase family protein 2.209e-10
Internal
sp_v3.0_unigene14989 SustainPine v3.0 456
AutoFact: chromatin remodeling factor18 [Arabidopsis thaliana] gb|AEE32273.1| chromatin remodeling factor18 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene15357 SustainPine v3.0 324
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 3.0e-26
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Putative transcriptional regulator 3.114e-08
Internal
sp_v3.0_unigene15846 SustainPine v3.0 965
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-13
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.618e-06
N-terminus
sp_v3.0_unigene15851 SustainPine v3.0 631
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain