Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: helicase activity

Term: GO:0004386  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene62181 SustainPine v3.0 214
• AutoFact: putative helicase [Oryza sativa Japonica Group] 7.0e-31
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative RNA helicase A 2.414e-11
Internal
sp_v3.0_unigene62387 SustainPine v3.0 286
• AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 3.0e-11
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene62720 SustainPine v3.0 292
• AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 1.0e-27
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.904e-09
Internal
sp_v3.0_unigene63058 SustainPine v3.0 139
• AutoFact: DNA repair protein RAD54-like [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene63305 SustainPine v3.0 169
• AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 3.0e-14
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: ATP-dependent RNA helicase, putative 5.145e-09
Internal
sp_v3.0_unigene63357 SustainPine v3.0 144
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63777 SustainPine v3.0 298
• AutoFact: putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] 5.0e-17
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64526 SustainPine v3.0 201
• AutoFact: SNF2 superfamily RAD5 protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S188_PHYPA 2.0e-12
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64589 SustainPine v3.0 235
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group] gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza 5.0e-08
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64604 SustainPine v3.0 231
• AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TQZ8_PHYPA 1.0e-20
• FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chromatin remodeling complex subunit 5.653e-08
Internal
sp_v3.0_unigene64878 SustainPine v3.0 146
• AutoFact: DNA repair and recombination protein RAD26, putative n=1 Tax=Ricinus communis RepID=B9SV29_RICCO 1.0e-16
• FL-Next: tr=DNA repair and recombination protein RAD26, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene65355 SustainPine v3.0 179
• AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKN3_PHYPA 2.0e-22
• FL-Next: tr=SNF2 family DNA-dependent ATPase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene67156 SustainPine v3.0 242
• AutoFact: SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] gb|AEE28683.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] 5.0e-14
• FL-Next: tr=Helicase-like transcription factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Chromatin remodeling complex subunit 2.964e-06
Internal
sp_v3.0_unigene67173 SustainPine v3.0 281
• AutoFact: Dicer-like 3 n=1 Tax=Physcomitrella patens RepID=B3SRQ0_9BRYO 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like 3 9.643e-09
Internal
sp_v3.0_unigene68057 SustainPine v3.0 131
• AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 5.0e-11
• FL-Next: tr=ATP-dependent RNA helicase Dhx29; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: ATP-dependent RNA helicase, putative 4.01e-12
Internal
sp_v3.0_unigene68565 SustainPine v3.0 184
• AutoFact: Splicing endonuclease positive effector sen1, putative n=1 Tax=Ricinus communis RepID=B9RJG9_RICCO 4.0e-13
• FL-Next: tr=Splicing endonuclease positive effector sen1, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene68688 SustainPine v3.0 153
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 8.0e-17
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene68735 SustainPine v3.0 253
• AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9STJ2_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA repair helicase rad5,16, putative 2.683e-07
Internal
sp_v3.0_unigene70000 SustainPine v3.0 391
• AutoFact: Unassigned protein
• FL-Next: tr=ATP-dependent helicase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene70152 SustainPine v3.0 356
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9IHX1_POPTR 1.0e-19
• FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 1.917e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain