Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase-associated domain

Term: IPR007502  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127850 SustainPine v3.0 829
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene128017 SustainPine v3.0 690
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Misassembled
sp_v3.0_unigene128088 SustainPine v3.0 1093
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative N-terminus
sp_v3.0_unigene131190 SustainPine v3.0 602
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131364 SustainPine v3.0 362
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 1.00053e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131645 SustainPine v3.0 221
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Streptomyces cyclase/dehydrase family protein 8.439e-09
Internal
sp_v3.0_unigene131946 SustainPine v3.0 380
AutoFact: Adenylate kinase 1, putative n=1 Tax=Ricinus communis RepID=B9RMJ0_RICCO 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate kinase 1, putative 1.563e-08
Putative N-terminus
sp_v3.0_unigene132331 SustainPine v3.0 323
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 6.0e-39
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.289e-07
Internal
sp_v3.0_unigene134597 SustainPine v3.0 241
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 6.0e-15
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene135916 SustainPine v3.0 474
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=B8LMQ9_PICSI 1.99993e-41
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene137378 SustainPine v3.0 262
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 5.0e-33
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.474e-14
Internal
sp_v3.0_unigene138934 SustainPine v3.0 403
AutoFact: Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Arabidopsis thaliana RepID=Q8VY00_ARATH 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pre-mRNA splicing factor RNA helicase 7.997e-09
Internal
sp_v3.0_unigene140718 SustainPine v3.0 698
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene140798 SustainPine v3.0 713
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene145320 SustainPine v3.0 374
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RX76_PHYPA 2.0e-18
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative C-terminus
sp_v3.0_unigene145452 SustainPine v3.0 329
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 1.0e-15
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene145562 SustainPine v3.0 354
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 3.0e-28
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative C-terminus
sp_v3.0_unigene145666 SustainPine v3.0 305
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 1.4013e-45
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene148088 SustainPine v3.0 499
AutoFact: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase n=2 Tax=Arabidopsis thaliana RepID=DHX8_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.396e-10
Internal
sp_v3.0_unigene148679 SustainPine v3.0 209
AutoFact: putative helicase [Oryza sativa Japonica Group] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.916e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain