Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase-associated domain

Term: IPR007502  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161070 SustainPine v3.0 389
AutoFact: putative helicase [Oryza sativa Japonica Group] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.571e-14
Putative N-terminus
sp_v3.0_unigene161597 SustainPine v3.0 424
AutoFact: putative gag-pol polyprotein [Oryza sativa Japonica Group] gb|ABF96256.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.591e-07
Internal
sp_v3.0_unigene162084 SustainPine v3.0 340
AutoFact: helicase, putative [Arabidopsis thaliana] 2.0e-23
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162645 SustainPine v3.0 332
AutoFact: DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.574e-07
C-terminus
sp_v3.0_unigene162843 SustainPine v3.0 464
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.716e-16
Internal
sp_v3.0_unigene163408 SustainPine v3.0 407
AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene163697 SustainPine v3.0 310
AutoFact: RVT_2 domain containing protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyprotein, putative 1.765e-07
Internal
sp_v3.0_unigene163984 SustainPine v3.0 185
AutoFact: RNA helicase - like protein [Arabidopsis thaliana] emb|CAB78848.1| RNA helicase-like protein [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Internal
sp_v3.0_unigene183603 SustainPine v3.0 334
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 6.0e-33
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.642e-14
Internal
sp_v3.0_unigene185638 SustainPine v3.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.418e-16
C-terminus
sp_v3.0_unigene190747 SustainPine v3.0 324
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 2.0e-14
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene192866 SustainPine v3.0 612
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IM72_AZOC5 1.4013e-45
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene196280 SustainPine v3.0 119
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Primula vulgaris] 4.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene199229 SustainPine v3.0 549
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 5.04467e-44
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.971e-19
Internal
sp_v3.0_unigene199662 SustainPine v3.0 361
AutoFact: Adenylate kinase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P2Z9_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate kinase 5.371e-09
Internal
sp_v3.0_unigene205765 SustainPine v3.0 877
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene208556 SustainPine v3.0 740
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] 6.0e-26
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative RNA helicase 1.97e-07
Putative Complete
sp_v3.0_unigene209640 SustainPine v3.0 463
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 9.031e-10
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain