Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: response to light stimulus

Term: GO:0009416  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene125390 SustainPine v3.0 273
• AutoFact: Transcription initiation factor TFIID subunit 1 n=5 Tax=Oryza sativa RepID=TAF1_ORYSJ 3.0e-28
• FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor TFIID, subunit TAF1 4.823e-09
Internal
sp_v3.0_unigene126679 SustainPine v3.0 1765
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Complete
sp_v3.0_unigene126821 SustainPine v3.0 1665
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 4.867e-31
Putative Complete
sp_v3.0_unigene126936 SustainPine v3.0 1486
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.4083e-42
Misassembled
sp_v3.0_unigene126966 SustainPine v3.0 1147
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
C-terminus
sp_v3.0_unigene127017 SustainPine v3.0 1377
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 2.252e-36
C-terminus
sp_v3.0_unigene127118 SustainPine v3.0 602
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase [Marchantia polymorpha] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 5.122e-33
C-terminus
sp_v3.0_unigene127152 SustainPine v3.0 1705
• AutoFact: Enolase n=3 Tax=Picea sitchensis RepID=B8LL07_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Enolase 0.0
Complete
sp_v3.0_unigene127848 SustainPine v3.0 1378
• AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 3.631e-36
C-terminus
sp_v3.0_unigene127997 SustainPine v3.0 1138
• AutoFact: 3-ketoacyl-CoA synthase n=7 Tax=Poaceae RepID=C5YVX8_SORBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 0.0
Complete
sp_v3.0_unigene128173 SustainPine v3.0 944
• AutoFact: glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase 0.0
Internal
sp_v3.0_unigene128255 SustainPine v3.0 936
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=A9NVH1_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-ketoacyl-coa synthase family protein 4.288e-15
Putative N-terminus
sp_v3.0_unigene128417 SustainPine v3.0 1015
• AutoFact: Cytosolic aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q9LRE9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Betaine aldehyde dehydrogenase 0.0
Putative C-terminus
sp_v3.0_unigene128667 SustainPine v3.0 579
• AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5AD26_PICSI 0.0
• FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Acyltransferase, putative 1.375e-33
Internal
sp_v3.0_unigene128735 SustainPine v3.0 623
• AutoFact: Putative NAM (no apical meristem) protein [Oryza sativa Japonica Group] gb|ABF95729.1| NAC domain transcription factor, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01634.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene130051 SustainPine v3.0 417
• AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.746e-07
C-terminus
sp_v3.0_unigene130098 SustainPine v3.0 584
• AutoFact: Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Marchantia polymorpha RepID=Q8VXD7_MARPO 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glyceraldehyde-3-phosphate dehydrogenase subunit A 4.819e-30
C-terminus
sp_v3.0_unigene130136 SustainPine v3.0 422
• AutoFact: F-box family protein n=1 Tax=Populus trichocarpa RepID=B9GK99_POPTR 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F-box family protein 1.224e-38
N-terminus
sp_v3.0_unigene131202 SustainPine v3.0 562
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=A9PB02_POPTR 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene131778 SustainPine v3.0 509
• AutoFact: cytochrome P450 monooxygenase CYP72A67 [Glycine max] 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450, putative 4.558e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain