Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene193327 SustainPine v3.0 495
AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Polysphondylium pallidum RepID=D3AVW2_POLPA 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Melastoma malabathricum. 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
Complete
sp_v3.0_unigene193394 SustainPine v3.0 641
AutoFact: Probable malate dehydrogenase 2, mitochondrial n=1 Tax=Dictyostelium discoideum RepID=MDHB_DICDI 0.0
FL-Next: sp=Malate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene193581 SustainPine v3.0 412
AutoFact: Probable malate dehydrogenase 2, mitochondrial n=1 Tax=Dictyostelium discoideum RepID=MDHB_DICDI 2.0e-28
FL-Next: sp=Malate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 2.33e-35
C-terminus
sp_v3.0_unigene193615 SustainPine v3.0 449
AutoFact: Dihydroxy-acid dehydratase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1E8_9PLAN 3.0e-21
FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
Sma3: Dihydroxy-acid dehydratase 2.351e-09
C-terminus
sp_v3.0_unigene193669 SustainPine v3.0 406
AutoFact: 50S ribosomal protein L11 n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=RL11_CYTH3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 50S ribosomal protein L11, chloroplastic 5.81259e-42
C-terminus
sp_v3.0_unigene193936 SustainPine v3.0 205
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6T4_PHYPA 2.0e-21
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene194289 SustainPine v3.0 513
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene195101 SustainPine v3.0 156
AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-08
FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene195707 SustainPine v3.0 207
AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 2.0e-20
FL-Next: tr=Glutathione S-transferase-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 2.484e-14
Putative C-terminus
sp_v3.0_unigene197834 SustainPine v3.0 398
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_133, whole genome shotgun sequence 6.192e-11
C-terminus
sp_v3.0_unigene197849 SustainPine v3.0 99
AutoFact: RecName: Full=Ferredoxin-dependent glutamate synthase; AltName: Full=FD-GOGAT 9.0e-10
FL-Next: sp=Ferredoxin-dependent glutamate synthase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ferredoxin-dependent glutamate synthase 1.032e-29
Internal
sp_v3.0_unigene198115 SustainPine v3.0 177
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chloroplast At1g16080 protein 1.594e-13
Internal
sp_v3.0_unigene198244 SustainPine v3.0 585
AutoFact: Herpes_gp2 multi-domain protein 9.0e-15
putative_coding
sp_v3.0_unigene198615 SustainPine v3.0 270
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Picea sitchensis RepID=B8LPE1_PICSI 9.00054e-42
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
Internal
sp_v3.0_unigene198721 SustainPine v3.0 409
AutoFact: Methionine-R-sulfoxide reductase SelR, putative n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1DMI4_NEOFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine sulfoxide reductase type 4.42e-14
C-terminus
sp_v3.0_unigene198798 SustainPine v3.0 587
AutoFact: Glutathione peroxidase n=1 Tax=Taiwanofungus camphoratus RepID=B8K1J5_TAICA 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene198865 SustainPine v3.0 434
AutoFact: Peptide methionine sulfoxide reductase msrB/msrA n=2 Tax=Pyrenophora RepID=B2WK75_PYRTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptide methionine sulfoxide reductase 0.0
C-terminus
sp_v3.0_unigene199939 SustainPine v3.0 264
AutoFact: Peroxiredoxin 2, isoform CRA_a n=1 Tax=Homo sapiens RepID=A6NIW5_HUMAN 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin peroxidase 5.022e-16
Internal
sp_v3.0_unigene200026 SustainPine v3.0 451
AutoFact: 82 kDa heat shock protein n=16 Tax=Bdelloidea RepID=B2L3I6_9BILA 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Internal
sp_v3.0_unigene200237 SustainPine v3.0 372
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FQT3_PHATC 2.0e-34
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain