Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene188819 SustainPine v3.0 476
AutoFact: Superoxide dismutase n=1 Tax=Ectocarpus siliculosus RepID=D8LI17_ECTSI 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Superoxide dismutase 0.0
C-terminus
sp_v3.0_unigene188957 SustainPine v3.0 481
AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Maconellicoccus hirsutus RepID=A2I463_MACHI 5.99756e-43
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
C-terminus
sp_v3.0_unigene189013 SustainPine v3.0 763
AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene189150 SustainPine v3.0 1207
AutoFact: Adenylosuccinate synthetase n=1 Tax=Picea sitchensis RepID=D5A8A1_PICSI 0.0
FL-Next: sp=Adenylosuccinate synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylosuccinate synthetase 0.0
Complete
sp_v3.0_unigene189421 SustainPine v3.0 708
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
Putative Complete
sp_v3.0_unigene189522 SustainPine v3.0 619
AutoFact: Glucose-1-phosphate adenylyltransferase n=1 Tax=Ricinus communis RepID=B9RN02_RICCO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glucose-1-phosphate adenylyltransferase 0.0
C-terminus
sp_v3.0_unigene189911 SustainPine v3.0 528
AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene190047 SustainPine v3.0 364
AutoFact: Elongation factor Tu-2 n=1 Tax=Streptomyces ramocissimus RepID=EFTU2_STRRA 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene190103 SustainPine v3.0 438
AutoFact: Transketolase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IAN1_CHLRE 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 4.692e-19
C-terminus
sp_v3.0_unigene190164 SustainPine v3.0 517
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Polysphondylium pallidum RepID=D3BL27_POLPA 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Internal
sp_v3.0_unigene190201 SustainPine v3.0 557
AutoFact: Nucleoside diphosphate kinase 1 n=5 Tax=Papilionoideae RepID=NDK1_SOYBN 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene190215 SustainPine v3.0 407
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Argopecten irradians RepID=A8QKJ4_AEQIR 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene190317 SustainPine v3.0 409
AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Entamoeba RepID=B0ET56_ENTDI 9.99967e-42
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene190461 SustainPine v3.0 425
AutoFact: ATPase n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UKK1_9EUKA 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copper-transporting atpase p-type, putative 1.845e-19
Internal
sp_v3.0_unigene190552 SustainPine v3.0 256
AutoFact: Malate dehydrogenase n=1 Tax=Chlorella variabilis RepID=E1Z349_9CHLO 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene190571 SustainPine v3.0 442
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Acaryochloris marina MBIC11017 RepID=NDK_ACAM1 1.4013e-45
FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene190701 SustainPine v3.0 266
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) n=1 Tax=Juglans regia RepID=A7XEE1_9ROSI 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dehydroquinate dehydratase/ shikimate dehydrogenase 3.032e-19
Internal
sp_v3.0_unigene190926 SustainPine v3.0 310
AutoFact: Ferritin n=1 Tax=Pyrus pyrifolia RepID=A8CZZ4_PYRPY 2.0e-17
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene191079 SustainPine v3.0 420
AutoFact: Glutamine synthetase n=4 Tax=Caenorhabditis RepID=Q9U307_CAEEL 4.0e-36
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene191135 SustainPine v3.0 662
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Glomerella graminicola M1.001 RepID=E3QB26_COLGM 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain