Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene21188 SustainPine v3.0 873
AutoFact: RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags: Precursor gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata] gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tryptophan synthase beta subunit 2.407e-12
C-terminus
sp_v3.0_unigene21245 SustainPine v3.0 2656
AutoFact: RuBisCO large subunit-binding protein subunit alpha n=3 Tax=Andropogoneae RepID=B6SXW8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: groEL protein 2.72973e-42
Complete
sp_v3.0_unigene21263 SustainPine v3.0 917
AutoFact: glutathione S-transferase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: IN2-1 protein 4.997e-12
Complete
sp_v3.0_unigene21358 SustainPine v3.0 1073
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; crystallinum). 0.0
Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene21393 SustainPine v3.0 1098
AutoFact: transaldolase [Arabidopsis thaliana] emb|CAB87149.1| transaldolase-like protein [Arabidopsis thaliana] gb|AAL07145.1| putative transaldolase [Arabidopsis thaliana] gb|AAM45123.1| putative transaldolase [Arabidopsis thaliana] gb|AAM64693.1| transaldolase-l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transaldolase 9.909e-11
N-terminus
sp_v3.0_unigene21484 SustainPine v3.0 579
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene21563 SustainPine v3.0 1916
AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 0.0
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 0.0
Complete
sp_v3.0_unigene21775 SustainPine v3.0 2184
AutoFact: 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dehydroquinate dehydratase/ shikimate dehydrogenase 7.226e-19
Complete
sp_v3.0_unigene21887 SustainPine v3.0 749
AutoFact: Peptide methionine sulfoxide reductase, putative n=1 Tax=Toxoplasma gondii RepID=B9PMF9_TOXGO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptide methionine sulfoxide reductase 0.0
Complete
sp_v3.0_unigene22044 SustainPine v3.0 566
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Cyanothece sp. PCC 7425 RepID=NDK_CYAP4 0.0
FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete
sp_v3.0_unigene22046 SustainPine v3.0 1106
AutoFact: Glutamate synthase, putative n=1 Tax=Ricinus communis RepID=B9RII5_RICCO 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glutamate synthase 3.095e-35
Internal
sp_v3.0_unigene22153 SustainPine v3.0 1404
AutoFact: Fiber annexin n=2 Tax=Gossypium hirsutum RepID=O82090_GOSHI 0.0
FL-Next: sp=Annexin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Annexin 2.227e-23
Complete
sp_v3.0_unigene22273 SustainPine v3.0 1676
AutoFact: Fructose-1,6-bisphosphatase, putative n=1 Tax=Ricinus communis RepID=B9T3E7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-1,6-bisphosphatase 0.0
Complete
sp_v3.0_unigene22285 SustainPine v3.0 1125
AutoFact: Pyruvate kinase isozyme A, chloroplastic n=3 Tax=Ricinus communis RepID=KPYA_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyruvate kinase 0.0
Putative Complete
sp_v3.0_unigene22308 SustainPine v3.0 465
AutoFact: RecName: Full=Adenylate kinase, chloroplastic; Short=AK; AltName: Full=ATP-AMP transphosphorylase pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a) pdb|1ZAK|B Chain B, Adenylate Kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Adenylate kinase 7.161e-16
N-terminus
sp_v3.0_unigene22613 SustainPine v3.0 690
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Papilionoideae RepID=G3PB_PEA 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic 3.076e-12
N-terminus
sp_v3.0_unigene22670 SustainPine v3.0 1368
AutoFact: pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Quinone oxidoreductase-like protein 5.951e-07
Complete
sp_v3.0_unigene22795 SustainPine v3.0 1609
AutoFact: uridylyltransferase-related protein [Arabidopsis thaliana] gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana] gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana] gb|AAP13425.1| At1g16880 [Arabidopsis thaliana] gb|AEE29513.1| urid 0.0
FL-Next: sp=Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Amino acid binding protein, putative 1.87e-07
Complete
sp_v3.0_unigene22804 SustainPine v3.0 866
AutoFact: Probable fructokinase-4 n=3 Tax=Arabidopsis RepID=SCRK4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructokinase 1.214e-22
C-terminus
sp_v3.0_unigene22933 SustainPine v3.0 686
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Phytophthora infestans T30-4 RepID=D0ND55_PHYIT 0.0
FL-Next: sp=Nucleoside diphosphate kinase; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
Sma3: Nucleoside diphosphate kinase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain