Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17976 SustainPine v3.0 1361
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene18106 SustainPine v3.0 1610
AutoFact: DAG protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RTA0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DAG protein 5.219e-29
Complete
sp_v3.0_unigene18160 SustainPine v3.0 754
AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene18182 SustainPine v3.0 1707
AutoFact: Shikimate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S3X5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dehydroquinate dehydratase/ shikimate dehydrogenase 5.724e-19
C-terminus
sp_v3.0_unigene18292 SustainPine v3.0 1096
AutoFact: 50S ribosomal protein L11 [Arabidopsis thaliana] sp|Q9MAP3.1|RK11_ARATH RecName: Full=50S ribosomal protein L11, chloroplastic; AltName: Full=CL11; Flags: Precursor gb|AAF31280.1|AC006424_9 Very similar to Spinacia oleracea 50S ribosomal p> [Arabidopsis t 5.0e-37
FL-Next: sp=50S ribosomal protein L11, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 50S ribosomal protein L11, chloroplastic 2.887e-40
Complete
sp_v3.0_unigene18326 SustainPine v3.0 2630
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene18336 SustainPine v3.0 2058
AutoFact: DAG protein n=3 Tax=Zea mays RepID=B6SJX7_MAIZE 1.0e-39
FL-Next: sp=DAG protein, chloroplastic; Antirrhinum majus (Garden snapdragon). 0.0
Sma3: DAG protein 8.706e-17
Complete
sp_v3.0_unigene18351 SustainPine v3.0 1101
AutoFact: Acyl-[acyl-carrier-protein] desaturase n=1 Tax=Picea sitchensis RepID=A9NVD4_PICSI 0.0
FL-Next: sp=Acyl-[acyl-carrier-protein] desaturase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Acyl-[acyl-carrier protein] desaturase 0.0
N-terminus
sp_v3.0_unigene18678 SustainPine v3.0 989
AutoFact: Lipoxygenase n=2 Tax=Populus trichocarpa RepID=B9HJW6_POPTR 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene18701 SustainPine v3.0 668
AutoFact: Thioredoxin reductase n=2 Tax=Picea sitchensis RepID=A9NXV4_PICSI 0.0
FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin reductase 0.0
C-terminus
sp_v3.0_unigene18820 SustainPine v3.0 2666
AutoFact: Acetyl-CoA carboxylase, putative n=1 Tax=Ricinus communis RepID=B9SFG9_RICCO 0.0
FL-Next: sp=Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Pyruvate carboxylase 2.666e-11
Complete
sp_v3.0_unigene18844 SustainPine v3.0 845
AutoFact: Lipoxygenase n=1 Tax=Camellia sinensis RepID=A8W7J7_CAMSI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene18874 SustainPine v3.0 1462
AutoFact: 3-isopropylmalate dehydratase, putative n=1 Tax=Ricinus communis RepID=B9SXE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 3-isopropylmalate dehydratase small subunit 9.17e-09
Putative Complete
sp_v3.0_unigene18965 SustainPine v3.0 581
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Pleurotus ostreatus RepID=Q96TV2_PLEOS 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene18967 SustainPine v3.0 419
AutoFact: Catalase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RDR1_PHYPA 0.0
FL-Next: sp=Catalase; Pinus sylvestris (Scots pine). 0.0
Sma3: Catalase 0.0
N-terminus
sp_v3.0_unigene19124 SustainPine v3.0 1386
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DAG protein 7.848e-25
Putative Complete
sp_v3.0_unigene19153 SustainPine v3.0 1854
AutoFact: Lipoxygenase n=2 Tax=Populus trichocarpa RepID=B9HJW6_POPTR 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
C-terminus
sp_v3.0_unigene19155 SustainPine v3.0 1127
AutoFact: glyceraldehyde-3-phosphate dehydrogenase B subunit [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyceraldehyde-3-phosphate dehydrogenase 2.8026e-45
C-terminus
sp_v3.0_unigene19261 SustainPine v3.0 1214
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycolate oxidase 1.24295e-42
Putative N-terminus
sp_v3.0_unigene19322 SustainPine v3.0 970
AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Uncharacterized protein ycf83 4.83e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain