Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA repair

Term: GO:0006281  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27672 SustainPine v3.0 1819
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 1.023e-10
C-terminus
sp_v3.0_unigene27869 SustainPine v3.0 933
AutoFact: Ca2+-transporting ATPase [Arabidopsis thaliana] sp|O81108.1|ACA2_ARATH RecName: Full=Calcium-transporting ATPase 2, plasma membrane-type; AltName: Full=Ca(2+)-ATPase isoform 2 gb|AAC26997.1| plasma membrane-type calcium ATPase [Arabidopsis thaliana] emb|C 0.0
FL-Next: sp=Calcium-transporting ATPase 2, plasma membrane-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cation-transporting atpase plant, putative 6.23e-14
N-terminus
sp_v3.0_unigene28001 SustainPine v3.0 2738
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 2.426e-06
Complete
sp_v3.0_unigene28390 SustainPine v3.0 2353
AutoFact: geminivirus Rep-interacting motor protein [Arabidopsis thaliana] gb|AED91547.1| geminivirus Rep-interacting motor protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene28608 SustainPine v3.0 1099
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SS47_RICCO 8.99999e-40
FL-Next: tr=O-linked n-acetylglucosamine transferase, ogt, putative; Ricinus communis (Castor bean). 0.0
Sma3: TPR Domain containing protein, expressed 4.162e-09
C-terminus
sp_v3.0_unigene28655 SustainPine v3.0 407
AutoFact: alpha/beta fold family hydrolase [Synechococcus sp. WH 7803] emb|CAK22638.1| Alpha/beta hydrolase superfamily [Synechococcus sp. WH 7803] 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene29221 SustainPine v3.0 459
AutoFact: pfam04139, Rad9, Rad9 3.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene29367 SustainPine v3.0 2039
AutoFact: transcription initiation factor TFIIH subunit H4 [Arabidopsis thaliana] gb|AEE83838.1| transcription initiation factor TFIIH subunit H4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene29523 SustainPine v3.0 768
AutoFact: UPF0081 domain containing protein 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene30542 SustainPine v3.0 926
AutoFact: PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase-like [Monodelphis domestica] 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Putative Complete
sp_v3.0_unigene30616 SustainPine v3.0 1251
AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30773 SustainPine v3.0 1127
AutoFact: cell cycle checkpoint protein [Arabidopsis thaliana] gb|AEE83947.1| cell cycle checkpoint protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Rad1-like protein 7.788e-18
C-terminus
sp_v3.0_unigene31189 SustainPine v3.0 2412
AutoFact: OTU-like cysteine protease family protein [Arabidopsis thaliana] ref|NP_001119168.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] gb|AAM64524.1| unknown [Arabidopsis thaliana] dbj|BAD95211.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine-type peptidase, putative 3.52e-15
Complete
sp_v3.0_unigene34487 SustainPine v3.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.762e-11
Putative Complete
sp_v3.0_unigene34729 SustainPine v3.0 661
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene35200 SustainPine v3.0 1656
AutoFact: HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] dbj|BAD37897.1| HhH-GPD base excision DNA repair protein-related-like [Oryza sativa Japonica Group] gb|EEC80299.1| hypothetical protein OsI_22321 [Oryza sativa Indica Grou 0.0
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene37159 SustainPine v3.0 185
AutoFact: cell cycle checkpoint protein [Arabidopsis thaliana] gb|AAM91646.1| unknown protein [Arabidopsis thaliana] gb|AAR24667.1| At4g17760 [Arabidopsis thaliana] emb|CAE55213.1| Rad1-like protein [Arabidopsis thaliana] dbj|BAD43778.1| unknown protein [Arabidopsi 3.0e-08
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Rad1-like protein 1.667e-09
Putative N-terminus
sp_v3.0_unigene37536 SustainPine v3.0 1605
AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent DNA helicase, RecQ family protein, expressed 1.765e-11
C-terminus
sp_v3.0_unigene37550 SustainPine v3.0 518
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9IHW7_POPTR 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: P-type ATPase 1.668e-13
C-terminus
sp_v3.0_unigene37774 SustainPine v3.0 2133
AutoFact: Plasma membrane Ca2+-ATPase n=2 Tax=Papilionoideae RepID=Q9FVE8_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.168e-39
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain